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rifcsplowo2_01_scaffold_48500

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_48500_1
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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106..264
-----------------
DNA (159bp)
protein (53aa)
transposon-encoded protein n=1 Tax=Thermoplasma volcanium RepID=UPI0000164D2F
transposon-encoded protein
Transposase {ECO:0000313|EMBL:BAB59284.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain A
rifcsplowo2_01_scaffold_48500_2
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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248..1576
-----------------
DNA (1329bp)
protein (443aa)
IS66 family element, transposase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WJV4_METH6
IS66 family element, transposase
IS66 family element, transposase {ECO:0000313|EMBL:AET63395.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaet
rifcsplowo2_01_scaffold_48500_3

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comp(1672..3492)
-----------------
DNA (1821bp)
protein (607aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=1579375 species="Archaea.;"
DNA ligase id=5800225 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP-dependent DNA ligase
rifcsplowo2_01_scaffold_48500_4
AR17, Woesearchaeaota, DPANN, Archaea

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3532..4119
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382AFA5
nitroreductase Tax=AR17
Nitroreductase
rifcsplowo2_01_scaffold_48500_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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4258..4797
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=4677134 bin=GWA2_OP3_52_12 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
rifcsplowo2_01_scaffold_48500_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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4794..5189
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=4677132 bin=GWA2_OP3_52_12 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Displaying 6 items

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