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rifcsplowo2_01_scaffold_53897

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_53897_1
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(1..783)
-----------------
DNA (783bp)
protein (261aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] Tax=CG_Pacearch_05
Uncharacterized protein n=3 Tax=Solanum RepID=K4BVL0_SOLLC id=5103459 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_53897_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1109..1546
-----------------
DNA (438bp)
protein (146aa)
Blue (Type 1) copper domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E936_METEZ id=5103245 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
Blue (Type 1) copper protein
rifcsplowo2_01_scaffold_53897_3
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2500..3303
-----------------
DNA (804bp)
protein (268aa)
Multimeric flavodoxin WrbA-like protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FN39_METHJ
multimeric flavodoxin WrbA-like protein Tax=BJP_IG2102_Methanoregula_52_95
multimeric flavodoxin WrbA-like protein
rifcsplowo2_01_scaffold_53897_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3311..3934)
-----------------
DNA (624bp)
protein (208aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=CG_Woesearch_02
N-glycosylase/DNA lyase (EC:4.2.99.18)
Probable N-glycosylase/DNA lyase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRP6_ARCVS
rifcsplowo2_01_scaffold_53897_5
unknown

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comp(4037..4336)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53897_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4382..4897)
-----------------
DNA (516bp)
protein (172aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_53897_7

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comp(4932..5615)
-----------------
DNA (684bp)
protein (228aa)
Endonuclease III {ECO:0000313|EMBL:KHO55289.1}; EC=4.2.99.18 {ECO:0000313|EMBL:KHO55289.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Base excision DNA repair protein, HhH-GPD family n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 id=5103570 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Base excision DNA repair protein, HhH-GPD family
rifcsplowo2_01_scaffold_53897_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5806..6189)
-----------------
DNA (384bp)
protein (128aa)
Putative signal transduction protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
putative signal-transduction protein containing cAMP-binding and CBS domains Tax=RBG_13_Pacearchaeota_36_9_curated
signal transduction protein with CBS domains
rifcsplowo2_01_scaffold_53897_9
unknown

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comp(6349..6564)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53897_10
AR19, Pacearchaeaota, DPANN, Archaea

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comp(6618..7538)
-----------------
DNA (921bp)
protein (307aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I712_METB6
hypothetical protein Tax=AR19
hypothetical protein
rifcsplowo2_01_scaffold_53897_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(7588..8316)
-----------------
DNA (729bp)
protein (243aa)
Membrane protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D9R8_9FIRM
vacuolar iron family transporter Tax=CG_Pacearch_05
hypothetical protein
rifcsplowo2_01_scaffold_53897_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

8367..9419
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein Tax=CG_Pacearch_05
tRNA wybutosine-synthesizing protein 1-like protein; K15449 tRNA wybutosine-synthesizing protein 1 id=5050144 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Fe-S oxidoreductase
rifcsplowo2_01_scaffold_53897_13
unknown

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comp(9421..9765)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53897_14
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(10422..10790)
-----------------
DNA (369bp)
protein (123aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PK80_9ZZZZ
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsplowo2_01_scaffold_53897_15

Not on your lists

10912..12351
-----------------
DNA (1440bp)
protein (480aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] id=5041866 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KKM07544.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
purF; amidophosphoribosyltransferase
rifcsplowo2_01_scaffold_53897_16
Marssonina brunnea, Marssonina, Helotiales, Leotiomycetes, Ascomycota, Fungi

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comp(12362..13186)
-----------------
DNA (825bp)
protein (275aa)
PPE family protein n=1 Tax=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) RepID=K1WJC8_MARBU
PPE family protein {ECO:0000313|EMBL:EKD17755.1}; TaxID=1072389 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Dermateaceae; Marssonina.;" source="Marssonin
hypothetical protein
Displaying 16 items

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