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rifcsplowo2_01_scaffold_39654_17

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_32_9

partial RP 26 / 55 MC: 2 BSCG 5 / 51 ASCG 17 / 38 MC: 1
Location: 8535..9299

Top 3 Functional Annotations

Value Algorithm Source
rpr43; exosome RNA binding protein (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 227.0
  • Bit_score: 196
  • Evalue 1.10e-47
Exosome complex component Rrp4 n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PWR7_METTM similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 227.0
  • Bit_score: 196
  • Evalue 4.00e-47
exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 Tax=CG_Pacearch_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 229.0
  • Bit_score: 345
  • Evalue 7.50e-92

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Taxonomy

CG_Pacearch_05 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 765
ATGAACAAAAACAATCGAATTAAAACAATAAAACTAAGAAAAAATACAATTAACATGACCACAGAAAAAATAGAAGAAGAAAGCAATGGAGAACCGAGAGAAGTTATAGTCCCTGGAGAAACAATTGTATCTGGAGAAGATTATCTTCCTGGAGAAGGAGCAAAAAGAGAAGGAAAGGACATAGTTGCGCTAAGATACGGGCTTGTTGAAATATCTGGAAAGCTTGTAAAGGTTATTCCCCTGTCTGGAGTTTTTATTCCACGAAGAGGAAATGTAATTATTGGGCAGGTTACGGATATTAGCTTTAATGGATGGATGACAGACATTAATGCGCCTTATTCATCATTCCTTCCTGTTGCAGAAGTTCCTATGTATCTCGATAAAAACTGCTTGGCTGAATTTTTAGATATTGGAGAATTTTTCAGTGCAAAAATAAGCTCTGTAAAACAAAAAGGAATTGACTTGACTCTTGATGCAAGAGGGCTTGGAAGACTTGAAGACGGAATGATTATATTCATAAATCCCAATAAAGTGCCGAGAGTTATTGGAAAAGAAGGAAGCATGATAAAGCTTATTAAAGATGAGACAAATTGCAAAGTAACTATCGGGCAGAATGGACTAGTGTGGATTAAGGGAGATAATGTTGATGCTGAATTATTTGCAAAAAAGGCAATTAATTTTGTAACAGAAAAATCTTTTATACACGGACTAACAGATAAAGTAAAAGAATTTTTAGACAAAGAAAAAAAGGAGATGACTAAATAA
PROTEIN sequence
Length: 255
MNKNNRIKTIKLRKNTINMTTEKIEEESNGEPREVIVPGETIVSGEDYLPGEGAKREGKDIVALRYGLVEISGKLVKVIPLSGVFIPRRGNVIIGQVTDISFNGWMTDINAPYSSFLPVAEVPMYLDKNCLAEFLDIGEFFSAKISSVKQKGIDLTLDARGLGRLEDGMIIFINPNKVPRVIGKEGSMIKLIKDETNCKVTIGQNGLVWIKGDNVDAELFAKKAINFVTEKSFIHGLTDKVKEFLDKEKKEMTK*