ggKbase home page

rifcsplowo2_01_scaffold_39654

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_39654_1
unknown

Not on your lists

1..81
-----------------
DNA (81bp)
protein (27aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39654_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(174..695)
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein
id=5102999 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_39654_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(722..868)
-----------------
DNA (147bp)
protein (49aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_39654_4
unknown

Not on your lists

comp(884..1063)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39654_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(1667..2218)
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003669D41
methyltransferase Tax=CG_Pacearch_05
hypothetical protein
rifcsplowo2_01_scaffold_39654_6
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(2273..2677)
-----------------
DNA (405bp)
protein (135aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_39654_7
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(2975..4309)
-----------------
DNA (1335bp)
protein (445aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
hypothetical protein; K07021 Tax=CG_Pacearch_05
RNA-metabolising metallo-beta-lactamase
rifcsplowo2_01_scaffold_39654_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4381..5022)
-----------------
DNA (642bp)
protein (214aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035EF478
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_01_scaffold_39654_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

5075..5380
-----------------
DNA (306bp)
protein (102aa)
Marine sediment metagenome DNA, contig: S06H3_S04456 Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_39654_10
unknown

Not on your lists

5508..5732
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39654_11
unknown

Not on your lists

5732..6217
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39654_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

6475..6603
-----------------
DNA (129bp)
protein (43aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_05
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372A087
rifcsplowo2_01_scaffold_39654_13
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

6569..7144
-----------------
DNA (576bp)
protein (192aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_05
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5045733 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Proteasome subunit alpha
rifcsplowo2_01_scaffold_39654_14
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


7162..7839
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829AF7
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_05
Shwachman-Bodian-diamond syndrome protein
rifcsplowo2_01_scaffold_39654_15
unknown

Not on your lists

7841..8296
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39654_16
unknown

Not on your lists

8342..8557
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39654_17
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

8535..9299
-----------------
DNA (765bp)
protein (255aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-)
Exosome complex component Rrp4 n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PWR7_METTM
exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_39654_18
unknown

Not on your lists

9301..9504
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39654_19
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

9507..10019
-----------------
DNA (513bp)
protein (171aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=CG_Pacearch_05
exosome complex exonuclease Rrp41
Displaying 19 items

View Taxonomy