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rifcsplowo2_01_scaffold_6754

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6754_1

Not on your lists

comp(2..655)
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E2996
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:KHO51914.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
ABC-type multidrug transport system, ATP-ase compoment
rifcsplowo2_01_scaffold_6754_2
unknown

Not on your lists

comp(709..1902)
-----------------
DNA (1194bp)
protein (398aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH id=5103591 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_6754_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2018..2644)
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036745B5
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_6754_4
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(2926..3660)
-----------------
DNA (735bp)
protein (245aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_6754_5
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3758..4753
-----------------
DNA (996bp)
protein (332aa)
Pyruvate formate-lyase activating enzyme related protein n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A3I2_THESM
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF79438.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
rifcsplowo2_01_scaffold_6754_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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4795..5391
-----------------
DNA (597bp)
protein (199aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_6754_7

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5388..6083
-----------------
DNA (696bp)
protein (232aa)
protein of unknown function (DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:KHO53060.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsplowo2_01_scaffold_6754_8
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

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comp(6338..7033)
-----------------
DNA (696bp)
protein (232aa)
Cation transporter Tax=RBG_16_OP11_39_9b_curated
Uncharacterized protein id=3832839 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
divalent cation transporter mgtE family
rifcsplowo2_01_scaffold_6754_9

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comp(7030..7569)
-----------------
DNA (540bp)
protein (180aa)
Marine sediment metagenome DNA, contig: S01H4_L04093 {ECO:0000313|EMBL:GAG81697.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Uncharacterized protein id=3832839 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
mgtE-like divalent cation transporter
rifcsplowo2_01_scaffold_6754_10
unknown

Not on your lists

7644..7817
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6754_11
unknown

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comp(7820..8593)
-----------------
DNA (774bp)
protein (258aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6754_12
unknown

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comp(8663..10351)
-----------------
DNA (1689bp)
protein (563aa)
DNA polymerase X family / putative histidinol phosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C05_METBF id=5103471 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase X family / putative histidinol phosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C05_METBF Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_6754_13

Not on your lists

10422..10721
-----------------
DNA (300bp)
protein (100aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
Ribonuclease P protein component 4 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGC9_METFS id=5103674 bin=GW2011_AR20_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease P protein component 4
rifcsplowo2_01_scaffold_6754_14
unknown

Not on your lists

10746..11024
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6754_15
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


comp(11021..11218)
-----------------
DNA (198bp)
protein (66aa)
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Pacearch_04
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5045700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_6754_16
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(11279..11779)
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035ECC8C
GntR family transcriptional regulator Tax=GWA1_OD1_36_12
helix-turn-helix type 11 domain-containing protein
rifcsplowo2_01_scaffold_6754_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(11779..12012)
-----------------
DNA (234bp)
protein (78aa)
alias=gwa2_scaffold_1344_69 id=18248260 bin=AR5_curated_draft species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_6754_18

Not on your lists

comp(12086..12646)
-----------------
DNA (561bp)
protein (187aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEF1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH36909.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
metal-binding protein
rifcsplowo2_01_scaffold_6754_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(12774..13166)
-----------------
DNA (393bp)
protein (131aa)
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5048340 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=AR18
30S ribosomal protein S9
rifcsplowo2_01_scaffold_6754_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(13163..13573)
-----------------
DNA (411bp)
protein (137aa)
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5048339 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR18
50S ribosomal protein L13P
rifcsplowo2_01_scaffold_6754_21
unknown

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comp(13570..13731)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6754_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(13733..14095)
-----------------
DNA (363bp)
protein (121aa)
rpl18E; 50S ribosomal protein L18e; K02883 large subunit ribosomal protein L18e id=5048338 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl18E; 50S ribosomal protein L18e; K02883 large subunit ribosomal protein L18e Tax=AR18
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_6754_23
unknown

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comp(14065..14385)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6754_24

Not on your lists

comp(14524..15303)
-----------------
DNA (780bp)
protein (260aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_6754_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(15353..15631)
-----------------
DNA (279bp)
protein (93aa)
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 id=5051521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=AR18
30S ribosomal protein S11
rifcsplowo2_01_scaffold_6754_26

Not on your lists


comp(15812..16384)
-----------------
DNA (573bp)
protein (191aa)
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5051520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
30S ribosomal protein S4
rifcsplowo2_01_scaffold_6754_27

Not on your lists


comp(16387..16848)
-----------------
DNA (462bp)
protein (154aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_6754_28
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16895..17407)
-----------------
DNA (513bp)
protein (171aa)
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K07572 putative nucleotide binding protein Tax=AR18
DNA-binding protein
rifcsplowo2_01_scaffold_6754_29
unknown

Not on your lists

comp(17437..17763)
-----------------
DNA (327bp)
protein (109aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_6754_30
unknown

Not on your lists

18210..18581
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

Displaying items 1-30 of 63 in total

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