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rifcsplowo2_01_scaffold_10480

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10480_1
AR11, Woesearchaeaota, DPANN, Archaea

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2..1147
-----------------
DNA (1146bp)
protein (382aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] Tax=AR11
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FB5DB
hypothetical protein
rifcsplowo2_01_scaffold_10480_2
CG_Woesearch_02, Woesearchaeota, Archaea

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1144..4641
-----------------
DNA (3498bp)
protein (1166aa)
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase II large subunit n=1 Tax=nanoarchaeote Nst1 RepID=R1E5T5_9ARCH id=5103156 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase II large subunit
rifcsplowo2_01_scaffold_10480_3

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comp(4842..5918)
-----------------
DNA (1077bp)
protein (359aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6U5_METMS id=5103096 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62377.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10480_4
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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6188..6553
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ79270.1}; Flags: Fragment;; TaxID=1618418 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
rifcsplowo2_01_scaffold_10480_5
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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6677..7750
-----------------
DNA (1074bp)
protein (358aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ79271.1}; TaxID=1618418 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
rifcsplowo2_01_scaffold_10480_6
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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comp(7737..8090)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKQ79272.1}; TaxID=1618418 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
id=5103098 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_10480_7
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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8135..9145
-----------------
DNA (1011bp)
protein (337aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362E8B4
Tyrosine-tRNA ligase, cytoplasmic {ECO:0000313|EMBL:KKQ79273.1}; TaxID=1618418 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
tyrosyl-tRNA synthetase
rifcsplowo2_01_scaffold_10480_8
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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9142..9912
-----------------
DNA (771bp)
protein (257aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C9408
Agmatinase {ECO:0000313|EMBL:KKQ79274.1}; TaxID=1618418 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
Arginase
rifcsplowo2_01_scaffold_10480_9

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9909..10448
-----------------
DNA (540bp)
protein (180aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1579375 species="A
2'-5' RNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZRC7_THELI id=5103102 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
2'-5' RNA ligase
rifcsplowo2_01_scaffold_10480_10
unknown

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10484..10780
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10480_11
unknown

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comp(10777..11403)
-----------------
DNA (627bp)
protein (209aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZK2_METFV id=5103104 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/DEAH box helicase domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZK2_METFV Tax=AR20
DEAD/DEAH box helicase protein
rifcsplowo2_01_scaffold_10480_12
unknown

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comp(11405..13399)
-----------------
DNA (1995bp)
protein (665aa)
Helicase domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQU8_ARCVS id=5103105 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Helicase domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQU8_ARCVS Tax=AR20
Helicase protein
Displaying 12 items

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