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rifcsplowo2_01_scaffold_13036

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13036_1
unknown

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comp(270..1247)
-----------------
DNA (978bp)
protein (326aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13036_2

Not on your lists

1370..1582
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037944A6
Uncharacterized protein {ECO:0000313|EMBL:AIE91358.1}; TaxID=1455889 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_118_C08.;"
hypothetical protein
rifcsplowo2_01_scaffold_13036_3
unknown

Not on your lists

1686..2009
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13036_4
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

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2056..2685
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ64456.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
id=5043675 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_13036_5
CG_Woesearch_01, Woesearchaeota, Archaea

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2673..3155
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein
HEPN Tax=CG_Woesearch_01
HEPN id=5043676 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_13036_6

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3152..3277
-----------------
DNA (126bp)
protein (42aa)
id=5050163 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45096.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_13036_7
unknown

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3371..3673
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13036_8

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3732..5144
-----------------
DNA (1413bp)
protein (471aa)
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5049650 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000313|EMBL:KHO53507.1}; EC=6.3.5.7 {ECO:0000313|EMBL:KHO53507.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsplowo2_01_scaffold_13036_9

Not on your lists

5176..6366
-----------------
DNA (1191bp)
protein (397aa)
processing peptidase (EC:3.4.24.64) id=5041801 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Marine sediment metagenome DNA, contig: S01H1_L00186 {ECO:0000313|EMBL:GAF79717.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsplowo2_01_scaffold_13036_10

Not on your lists

6422..6889
-----------------
DNA (468bp)
protein (156aa)
DNA polymerase beta domain-containing protein; K07075 id=5041690 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47942.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA polymerase beta domain-containing protein
rifcsplowo2_01_scaffold_13036_11

Not on your lists

6886..7248
-----------------
DNA (363bp)
protein (121aa)
hypothetical protein id=5041689 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47941.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_01_scaffold_13036_12
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

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7254..8330
-----------------
DNA (1077bp)
protein (359aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F2F16
leucyl aminopeptidase Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
leucyl aminopeptidase
rifcsplowo2_01_scaffold_13036_13
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(8347..8622)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000370C82F
RelE protein; K06218 RelE protein Tax=CG_Pacearch_05
putative RelE protein
rifcsplowo2_01_scaffold_13036_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8619..8855)
-----------------
DNA (237bp)
protein (79aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376230B
Tax=AR19
rifcsplowo2_01_scaffold_13036_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


8943..10697
-----------------
DNA (1755bp)
protein (585aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Woesearch_01
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003663F84
rifcsplowo2_01_scaffold_13036_16

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10694..10978
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_13036_17
unknown

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10988..11221
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13036_18
unknown

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11223..11459
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13036_19

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11461..11874
-----------------
DNA (414bp)
protein (138aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO55627.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO55627.1};; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376F69F
Displaying 19 items

View Taxonomy