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rifcsplowo2_01_scaffold_19980

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_19980_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1..252
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003754E35
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_19980_2
unknown

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255..455
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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452..1102
-----------------
DNA (651bp)
protein (217aa)
Domain of unknown function DUF88 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_19980_4
AR13, Pacearchaeaota, DPANN, Archaea

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1074..2555
-----------------
DNA (1482bp)
protein (494aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=AR13
Type I restriction-modification system methyltransferase subunit n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBC2_9EURY
N-6 DNA methylase
rifcsplowo2_01_scaffold_19980_5
unknown

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comp(2600..3265)
-----------------
DNA (666bp)
protein (222aa)
DNA replication and repair protein RadC n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U4R8_9EURY id=5103077 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA replication and repair protein RadC n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U4R8_9EURY Tax=AR20
DNA replication and repair protein RadC
rifcsplowo2_01_scaffold_19980_6
unknown

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comp(3317..3751)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_7
AR18, Woesearchaeaota, DPANN, Archaea

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comp(4012..4191)
-----------------
DNA (180bp)
protein (60aa)
id=3673923 bin=PER_GWC2_41_7 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR18
rifcsplowo2_01_scaffold_19980_8
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(4227..4664)
-----------------
DNA (438bp)
protein (146aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037EAC2B
Putative uncharacterized protein Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_19980_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(4814..5011)
-----------------
DNA (198bp)
protein (66aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365353A
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_19980_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(5001..5576)
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A24
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_19980_11
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5897..7828)
-----------------
DNA (1932bp)
protein (644aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1H6_UNCMA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ37767.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsplowo2_01_scaffold_19980_12

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comp(7825..8454)
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein id=5049665 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53522.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
ArsR family transcriptional regulator
rifcsplowo2_01_scaffold_19980_13
unknown

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comp(8527..8670)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_14

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comp(8667..10031)
-----------------
DNA (1365bp)
protein (455aa)
hypothetical protein
id=5102943 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62224.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_19980_15
unknown

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comp(10081..10491)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_16
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

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10529..11500
-----------------
DNA (972bp)
protein (324aa)
hydroxymethylglutaryl-coenzyme A reductase Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
hydroxyneurosporene synthase id=15190302 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rifcsplowo2_01_scaffold_19980_17
unknown

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11550..11825
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_18
unknown

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comp(11822..12199)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_19
unknown

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12315..12785
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_20
unknown

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comp(12791..13213)
-----------------
DNA (423bp)
protein (141aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS Tax=AR20
SMC protein
rifcsplowo2_01_scaffold_19980_21
unknown

Not on your lists

comp(13339..14757)
-----------------
DNA (1419bp)
protein (473aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS Tax=AR20
SMC protein
rifcsplowo2_01_scaffold_19980_22
unknown

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comp(14754..15431)
-----------------
DNA (678bp)
protein (226aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19980_23

Not on your lists

comp(15428..16585)
-----------------
DNA (1158bp)
protein (386aa)
Metallophosphoesterase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXV9_METFV id=5103604 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AJF62885.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_19980_24
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

16696..17706
-----------------
DNA (1011bp)
protein (337aa)
Parallel beta-helix repeat protein Tax=AR13
Displaying 24 items

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