ggKbase home page

rifcsplowo2_01_scaffold_42627

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_42627_1
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(3..860)
-----------------
DNA (858bp)
protein (286aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Pacearch_04
Histidine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT
Histidine-tRNA ligase
rifcsplowo2_01_scaffold_42627_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1089..1970)
-----------------
DNA (882bp)
protein (294aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=2 Tax=Methanosarcina mazei RepID=M1P847_METMZ
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KKG67227.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosar
rifcsplowo2_01_scaffold_42627_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1975..2751)
-----------------
DNA (777bp)
protein (259aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AEED3
cell division ATPase MinD; K03609 septum site-determining protein MinD Tax=RBG_13_Pacearchaeota_33_26_curated
cell division ATPase MinD
rifcsplowo2_01_scaffold_42627_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2748..3185)
-----------------
DNA (438bp)
protein (146aa)
hypothetical protein
seg id=5044111 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
seg Tax=AR18
rifcsplowo2_01_scaffold_42627_5

Not on your lists

comp(3182..3658)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003645100
hypothetical protein
Marine sediment metagenome DNA, contig: S01H4_L06962 {ECO:0000313|EMBL:GAG84387.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_42627_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3689..4009)
-----------------
DNA (321bp)
protein (107aa)
alpha-NAC related protein; K03626 nascent polypeptide-associated complex subunit alpha Tax=AR17
Nascent polypeptide-associated complex protein; K03626 nascent polypeptide-associated complex subunit alpha id=5048387 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
nascent polypeptide-associated complex subunit alpha
rifcsplowo2_01_scaffold_42627_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4026..4190)
-----------------
DNA (165bp)
protein (55aa)
hypothetical protein
id=5047306 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_42627_8
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4240..4578)
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein
id=5103333 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_42627_9
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4580..4834)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein
id=5103334 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_42627_10
unknown

Not on your lists

5408..5605
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

Displaying 10 items

View Taxonomy