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rifcsplowo2_01_scaffold_43153

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_43153_1
unknown

Not on your lists

comp(3..92)
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_2
unknown

Not on your lists

comp(236..700)
-----------------
DNA (465bp)
protein (155aa)
Ribosomal protein L31e n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5Q9_9ARCH id=5103296 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal protein L31e n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5Q9_9ARCH Tax=AR20
Ribosomal protein L31e
rifcsplowo2_01_scaffold_43153_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(702..875)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein
id=5800694 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsplowo2_01_scaffold_43153_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(887..1300)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036953AC
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e Tax=AR11
30S ribosomal protein S19
rifcsplowo2_01_scaffold_43153_5
unknown

Not on your lists

1519..1806
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1808..2413)
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Putative membrane-associated protein/domain protein id=5799953 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
membrane protein
rifcsplowo2_01_scaffold_43153_7
unknown

Not on your lists

2616..3269
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_8
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

3271..4089
-----------------
DNA (819bp)
protein (273aa)
SAP domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GMC1_ACACA id=5103664 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SAP protein
hypothetical protein Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_43153_9
unknown

Not on your lists

4133..4822
-----------------
DNA (690bp)
protein (230aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4819..6201)
-----------------
DNA (1383bp)
protein (461aa)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=CG_Woesearch_02
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=5048461 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cysteinyl-tRNA synthetase
rifcsplowo2_01_scaffold_43153_11
unknown

Not on your lists

comp(6232..6447)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_12
unknown

Not on your lists

comp(6542..6655)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_13
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


6956..9283
-----------------
DNA (2328bp)
protein (776aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Pacearchaeota_33_26_curated
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH id=5103313 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Valine-tRNA ligase
rifcsplowo2_01_scaffold_43153_14

Not on your lists

9329..10111
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein
id=3230410 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
Uncharacterized protein {ECO:0000313|EMBL:KKW24896.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
rifcsplowo2_01_scaffold_43153_15
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

10105..10290
-----------------
DNA (186bp)
protein (62aa)
hypothetical protein
id=5103000 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_43153_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10356..11066
-----------------
DNA (711bp)
protein (237aa)
Predicted transcriptional regulator n=1 Tax=sediment metagenome RepID=D9PJC9_9ZZZZ
transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator
rifcsplowo2_01_scaffold_43153_17

Not on your lists

11068..11808
-----------------
DNA (741bp)
protein (247aa)
Protein containing DUF1814 domain n=1 Tax=sediment metagenome RepID=D9PJC8_9ZZZZ
Protein containing DUF1814 domain {ECO:0000313|EMBL:EFK96343.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
rifcsplowo2_01_scaffold_43153_18
unknown

Not on your lists

11857..12141
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_19
unknown

Not on your lists

12425..13594
-----------------
DNA (1170bp)
protein (390aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_20
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

13650..15143
-----------------
DNA (1494bp)
protein (498aa)
hypothetical protein
hypothetical protein Tax=AR13
id=5103573 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_43153_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15144..15464)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037436BF
Putative uncharacterized protein Tax=AR11
hypothetical protein
rifcsplowo2_01_scaffold_43153_22
unknown

Not on your lists

15538..15678
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_23
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

15775..15894
-----------------
DNA (120bp)
protein (40aa)
Putative toxin RelE4 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RELE4_METJA
hypothetical protein Tax=GWB2_Planctomycetes_41_19_curated
hypothetical protein
rifcsplowo2_01_scaffold_43153_24

Not on your lists

15962..17053
-----------------
DNA (1092bp)
protein (364aa)
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 id=5044964 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptide chain release factor subunit 1 {ECO:0000313|EMBL:KHO54564.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
eRF1; peptide chain release factor 1
rifcsplowo2_01_scaffold_43153_25
unknown

Not on your lists

17115..17414
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_26
unknown

Not on your lists

17489..17830
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_27
unknown

Not on your lists

17866..18114
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_28
unknown

Not on your lists

18155..18529
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43153_29
unknown

Not on your lists

comp(18542..18625)
-----------------
DNA (84bp)
protein (28aa)

This feature has no annotations

Displaying 29 items

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