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rifcsplowo2_01_scaffold_43659

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_43659_1
CG_Woesearch_02, Woesearchaeota, Archaea

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3..194
-----------------
DNA (192bp)
protein (64aa)
DEAD/H associated domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Woesearch_02
DEAD/H associated domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7W5_METSW id=5103576 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/H associated protein
rifcsplowo2_01_scaffold_43659_2
unknown

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229..387
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_3
CG_Woesearch_02, Woesearchaeota, Archaea

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387..1088
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
phosphoesterase; K06953 Tax=CG_Woesearch_02
Phosphoesterase
rifcsplowo2_01_scaffold_43659_4
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

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comp(1085..1981)
-----------------
DNA (897bp)
protein (299aa)
Cytochrome c, 27 heme-binding sites n=2 Tax=Geobacter sulfurreducens RepID=D7AMX1_GEOSK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
lipoprotein cytochrome c
rifcsplowo2_01_scaffold_43659_5

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comp(2014..2502)
-----------------
DNA (489bp)
protein (163aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside-diphosphate kinase id=5800774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_43659_6
unknown

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comp(2474..2809)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_7

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2882..3448
-----------------
DNA (567bp)
protein (189aa)
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH id=5103755 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved hypothetical membrane protein, peptidase family M50 {ECO:0000313|EMBL:KHO52812.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Conserved hypothetical membrane protein, peptidase family M50
rifcsplowo2_01_scaffold_43659_8
unknown

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comp(3429..3749)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_9
unknown

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comp(3814..4398)
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_10
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

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4504..4854
-----------------
DNA (351bp)
protein (117aa)
metallopeptidase-like protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
metallopeptidase
metallopeptidase id=5241554 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_43659_11
unknown

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comp(4847..6448)
-----------------
DNA (1602bp)
protein (534aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_12
unknown

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comp(6445..7284)
-----------------
DNA (840bp)
protein (280aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_13

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7558..9555
-----------------
DNA (1998bp)
protein (666aa)
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA id=5103761 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_43659_14
unknown

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comp(9556..10548)
-----------------
DNA (993bp)
protein (331aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_15
unknown

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comp(10545..11090)
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43659_16
unknown

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comp(11114..11212)
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

Displaying 16 items

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