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rifcsplowo2_01_scaffold_11553

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11553_1

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comp(104..847)
-----------------
DNA (744bp)
protein (248aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO45479.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_11553_2
unknown

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950..1426
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11553_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(1496..1885)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein id=4677132 bin=GWA2_OP3_52_12 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_11553_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(1882..2421)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=4677134 bin=GWA2_OP3_52_12 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
rifcsplowo2_01_scaffold_11553_5
CG_Woesearch_02, Woesearchaeota, Archaea

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2887..4623
-----------------
DNA (1737bp)
protein (579aa)
serine protease-like protein; K06870 uncharacterized protein Tax=CG_Woesearch_02
serine protease; K06870 uncharacterized protein id=5049207 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_11553_6
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

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4794..5648
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
hypothetical protein id=24392024 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
rifcsplowo2_01_scaffold_11553_7
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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5762..6379
-----------------
DNA (618bp)
protein (206aa)
Nucleotidyl transferase domain Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Nucleotidyl transferase domain id=5041878 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_11553_8
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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6363..6848
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BAF5F
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_11553_9
unknown

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6875..7393
-----------------
DNA (519bp)
protein (173aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSM3_9EURY id=5103468 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSM3_9EURY Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_11553_10
GWA2_OP11_35_19, Roizmanbacteria, Microgenomates, Bacteria

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7425..8117
-----------------
DNA (693bp)
protein (231aa)
BAAT/Acyl-CoA thioester hydrolase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QQR0_ACEAZ
Uncharacterized protein {ECO:0000313|EMBL:KKP72981.1}; TaxID=1618478 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_35_19.;"
BAAT/Acyl-CoA thioester hydrolase
rifcsplowo2_01_scaffold_11553_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8189..8497
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40763.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
nucleotide pyrophosphohydrolase
rifcsplowo2_01_scaffold_11553_12
unknown

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8501..8743
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11553_13
GWC2_RIF_OD1_13_49_10_curated, RIF-OD1-13, Parcubacteria, Bacteria

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8727..9110
-----------------
DNA (384bp)
protein (128aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV57_9BACT
Hypothetical conserved protein Tax=GWC2_RIF_OD1_13_49_10_curated
rifcsplowo2_01_scaffold_11553_14
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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9112..10188
-----------------
DNA (1077bp)
protein (359aa)
class V aminotransferase (NifS-like); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RBG_13_Pacearchaeota_33_26_curated
iscS; Cysteine desulfurase (EC:2.8.1.7)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038118B3
rifcsplowo2_01_scaffold_11553_15

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10185..10628
-----------------
DNA (444bp)
protein (148aa)
Vitamin K epoxide reductase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RFR8_DESPD id=5103586 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Vitamin K epoxide reductase {ECO:0000313|EMBL:KKQ57858.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Vitamin K epoxide reductase
rifcsplowo2_01_scaffold_11553_16

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10862..11539
-----------------
DNA (678bp)
protein (226aa)
DSBA oxidoreductase {ECO:0000313|EMBL:KKS94444.1}; TaxID=1618826 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_13.;"
DSBA-like thioredoxin domain-containing protein id=5799791 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_11553_17
GWA2_Ignavibacteria_55_11, GWA2_Ignavibacteria_55_11, GWA2_Ignavibacteria_55_11, Ignavibacteria, Ignavibacteriae, Bacteria

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11645..12691
-----------------
DNA (1047bp)
protein (349aa)
hypothetical protein id=4605342 bin=GWA2_Ignavibacteria_55_11 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein id=4605342 bin=GWA2_Ignavibacteria_55_11 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Displaying 17 items

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