ggKbase home page

rifcsplowo2_01_scaffold_28203

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_28203_1
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

354..1721
-----------------
DNA (1368bp)
protein (456aa)
Aldehyde dehydrogenase n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AI60_NITEC
aldehyde dehydrogenase
rifcsplowo2_01_scaffold_28203_2
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1733..3181
-----------------
DNA (1449bp)
protein (483aa)
Pyruvate, water dikinase n=1 Tax=uncultured bacterium RepID=K2EBL6_9BACT
phosphoenolpyruvate synthase
rifcsplowo2_01_scaffold_28203_3
unknown

Not on your lists

3178..3420
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

3417..5066
-----------------
DNA (1650bp)
protein (550aa)
Similar to acetolactate synthase id=4736580 bin=GWC2_Nitrospirae_57_13 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
acetolactate synthase
rifcsplowo2_01_scaffold_28203_5
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5188..5772)
-----------------
DNA (585bp)
protein (195aa)
Uncharacterized protein id=5048881 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_28203_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(5769..6353)
-----------------
DNA (585bp)
protein (195aa)
id=5048880 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_28203_7
unknown

Not on your lists

comp(6566..7057)
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_8
unknown

Not on your lists

comp(7057..7374)
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7569..8000
-----------------
DNA (432bp)
protein (144aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TVG9_9DELT
response receiver sensor histidine kinase
rifcsplowo2_01_scaffold_28203_10
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

8097..9014
-----------------
DNA (918bp)
protein (306aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=24413757 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
rifcsplowo2_01_scaffold_28203_11

Not on your lists

9019..9285
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5048732 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_28203_12

Not on your lists

comp(9282..9707)
-----------------
DNA (426bp)
protein (142aa)
Ribonuclease VapC n=1 Tax=Thermococcus sp. AM4 RepID=B7R4R9_9EURY
PIN domain-containing protein
rifcsplowo2_01_scaffold_28203_13

Not on your lists

comp(9955..10677)
-----------------
DNA (723bp)
protein (241aa)
transcriptional regulator TrmB
transcriptional regulator TrmB id=5241641 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_28203_14
unknown

Not on your lists

10906..11403
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11562..12275
-----------------
DNA (714bp)
protein (238aa)
Lipoate-protein ligase B/lipoate synthase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1N8_DESTA
lipoate-protein ligase B/lipoate synthase
rifcsplowo2_01_scaffold_28203_16
unknown

Not on your lists

12485..13417
-----------------
DNA (933bp)
protein (311aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_17

Not on your lists

13653..13976
-----------------
DNA (324bp)
protein (108aa)
hypothetical protein
id=5042269 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying 17 items

View Taxonomy