ggKbase home page

rifcsplowo2_01_scaffold_28630

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_28630_1
unknown

Not on your lists

comp(2..148)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28630_2

Not on your lists

186..1028
-----------------
DNA (843bp)
protein (281aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Heat shock protein HtpX
rifcsplowo2_01_scaffold_28630_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1190..1951
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X9C2_FLACA
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsplowo2_01_scaffold_28630_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1943..4132)
-----------------
DNA (2190bp)
protein (730aa)
Hef nuclease; K10896 fanconi anemia group M protein Tax=CG_Woesearch_02
Hef nuclease id=5800171 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Hef nuclease
rifcsplowo2_01_scaffold_28630_5
unknown

Not on your lists

comp(4168..4320)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28630_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(4585..4938)
-----------------
DNA (354bp)
protein (118aa)
Marine sediment metagenome DNA, contig: S01H1_S02805 Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_28630_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(4938..5678)
-----------------
DNA (741bp)
protein (247aa)
Peptidase M50 Tax=RBG_13_Woesearchaeota_36_6_curated
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_28630_8
unknown

Not on your lists

5926..6246
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28630_9

Not on your lists

comp(6285..6956)
-----------------
DNA (672bp)
protein (224aa)
Pheromone shutdown protein TraB {ECO:0000313|EMBL:KHO50523.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
TraB family protein id=5049565 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TraB family protein
rifcsplowo2_01_scaffold_28630_10

Not on your lists

7057..7335
-----------------
DNA (279bp)
protein (93aa)
hypothetical protein
Putative uncharacterized protein id=5800011 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61342.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Displaying 10 items

View Taxonomy