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rifcsplowo2_01_scaffold_5403

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5403_1
unknown

Not on your lists

3..83
DNA (81bp) protein (27aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5403_2
unknown

Not on your lists

93..389
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5403_3
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

456..1100
DNA (645bp) protein (215aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DSBA oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
DSBA oxidoreductase
rifcsplowo2_01_scaffold_5403_4

Not on your lists

1158..2465
DNA (1308bp) protein (436aa)
DSBA oxidoreductase
DSBA oxidoreductase id=5241602 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DSBA oxidoreductase {ECO:0000313|EMBL:AJF60593.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_5403_5
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(2476..3582)
DNA (1107bp) protein (369aa)
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
glutamate dehydrogenase (NADP)+ (EC:1.4.1.3)
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=5240704 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_5403_6
unknown

Not on your lists

comp(3654..3977)
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5403_7

Not on your lists

comp(4143..4634)
DNA (492bp) protein (164aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LN84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN38157.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_5403_8
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(4631..4999)
DNA (369bp) protein (123aa)
4'-phosphopantetheinyl transferase id=4735759 bin=GWC2_OP3-like_45_7 species=Nitrosopumilus maritimus genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:KKT60380.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
4'-phosphopantetheinyl transferase
rifcsplowo2_01_scaffold_5403_9
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(5001..5660)
DNA (660bp) protein (220aa)
Glycosyl transferase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TZ96_9EURY
putative formyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
family 2 glycosyl transferase
rifcsplowo2_01_scaffold_5403_10
unknown

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comp(5657..6292)
DNA (636bp) protein (212aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5403_11
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6289..7329)
DNA (1041bp) protein (347aa)
putative carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_16_Chloroflexi_50_9_curated
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI000361E647
hypothetical protein
rifcsplowo2_01_scaffold_5403_12
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7322..8182)
DNA (861bp) protein (287aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A269_THESM
rifcsplowo2_01_scaffold_5403_13
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8179..9267)
DNA (1089bp) protein (363aa)
spsE; phosphoenolpyruvate-sugar pyruvyltransferase (EC:2.5.-.-)
spore coat protein n=1 Tax=Bacillus amyloliquefaciens RepID=UPI0002AAA6A3
Spore coat protein {ECO:0000313|EMBL:AIW35605.1}; TaxID=1423 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis.;"
rifcsplowo2_01_scaffold_5403_14
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(9270..10559)
DNA (1290bp) protein (430aa)
nucleotide sugar dehydrogenase
nucleotide sugar dehydrogenase id=5241102 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KKW16185.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
rifcsplowo2_01_scaffold_5403_15
R_RIF_OD1_06_43_17b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(10549..10995)
DNA (447bp) protein (149aa)
putative uDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_43_17b_curated
putative uDP-glucose 4-epimerase (EC:5.1.3.2)
Putative UDP-glucose 4-epimerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHF6_9BACT
rifcsplowo2_01_scaffold_5403_16
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

comp(10992..11474)
DNA (483bp) protein (161aa)
putative uDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
putative uDP-glucose 4-epimerase (EC:5.1.3.2)
Putative UDP-glucose 4-epimerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHF6_9BACT
rifcsplowo2_01_scaffold_5403_17
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

comp(11502..14114)
DNA (2613bp) protein (871aa)
Aminotransferase class-III Tax=GWA1_Berkelbacteria_36_10
Aminotransferase class-III id=4574128 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
class III aminotransferase
rifcsplowo2_01_scaffold_5403_18
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(14111..15115)
DNA (1005bp) protein (335aa)
Oxidoreductase domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJQ5_DESAA
oxidoreductase domain-containing protein Tax=RBG_16_RIF03_38_10_curated
oxidoreductase domain-containing protein
rifcsplowo2_01_scaffold_5403_19
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15112..16221)
DNA (1110bp) protein (370aa)
UPI0003D1B5E4 related cluster n=1 Tax=unknown RepID=UPI0003D1B5E4
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase {ECO:0000313|EMBL:ETA67458.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanol
hypothetical protein
rifcsplowo2_01_scaffold_5403_20

Not on your lists

comp(16218..16697)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN42517.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5047515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_5403_21
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16951..18114
DNA (1164bp) protein (388aa)
Glycosyl transferase family 1 {ECO:0000313|EMBL:GAO34770.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricell
Glycosyl transferase, family I id=4972209 bin=GWA2_OP3_52_12 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
group 1 glycosyl transferase
rifcsplowo2_01_scaffold_5403_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

18148..18987
DNA (840bp) protein (280aa)
hypothetical protein Tax=AR9
Metal-dependent hydrolase, beta-lactamase superfamily III id=5799925 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
metal-dependent hydrolase, beta-lactamase superfamily III
rifcsplowo2_01_scaffold_5403_23

Not on your lists

19196..19561
DNA (366bp) protein (122aa)
response regulator receiver protein id=5045992 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Response regulator receiver protein {ECO:0000313|EMBL:KHO45802.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
rifcsplowo2_01_scaffold_5403_24
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

19650..21125
DNA (1476bp) protein (492aa)
signal transduction histidine kinase LytS id=5045991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
signal transduction histidine kinase LytS Tax=AR4
sensory box histidine kinase
rifcsplowo2_01_scaffold_5403_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21103..21924)
DNA (822bp) protein (274aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_5403_26
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22050..23027
DNA (978bp) protein (326aa)
Tetratricopeptide TPR_1 repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_5403_27

Not on your lists

23060..23341
DNA (282bp) protein (94aa)
PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=5046268 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase C {ECO:0000313|EMBL:KHO46069.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KHO46069.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
peptidyl-prolyl cis-trans isomerase C (EC:5.2.1.8)
rifcsplowo2_01_scaffold_5403_28

Not on your lists

23468..24577
DNA (1110bp) protein (370aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KHO50166.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KHO50166.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DB9B1
Tryptophan-tRNA ligase
rifcsplowo2_01_scaffold_5403_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(24578..24964)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LL73_9EURY
twitching motility protein PilT; K07062 Tax=RBG_13_Pacearchaeota_36_9_curated
PilT protein domain protein
rifcsplowo2_01_scaffold_5403_30
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(24951..25208)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAC6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02268.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
Displaying items 1-30 of 48 in total

View Taxonomy