ggKbase home page

rifcsplowo2_01_scaffold_26845

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_26845_1

Not on your lists

comp(420..809)
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FT78_9BACT
rifcsplowo2_01_scaffold_26845_2

Not on your lists

comp(820..1242)
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein
hypothetical protein id=5048098 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_26845_3

Not on your lists

comp(1211..2896)
-----------------
DNA (1686bp)
protein (562aa)
hypothetical protein id=5048511 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_26845_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2896..6690)
-----------------
DNA (3795bp)
protein (1265aa)
hypothetical protein id=5049573 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_26845_5

Not on your lists

6758..7141
-----------------
DNA (384bp)
protein (128aa)
coiled-coil id=5043755 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_26845_6
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

7193..7771
-----------------
DNA (579bp)
protein (193aa)
hypothetical protein
Putative uncharacterized protein id=5799950 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_26845_7

Not on your lists

comp(7781..8338)
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C85AB
hypothetical protein
rifcsplowo2_01_scaffold_26845_8

Not on your lists

comp(8338..8907)
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein
seg id=5043751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_26845_9

Not on your lists

comp(8917..9438)
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein
transmembrane_regions id=5042248 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_26845_10
unknown

Not on your lists

comp(9701..10039)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_11
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10079..10852)
-----------------
DNA (774bp)
protein (258aa)
Putative ABC-2 type transport system, ATP-binding and permease component id=4320766 bin=GWC2_OP3-like_45_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
ABC transporter
rifcsplowo2_01_scaffold_26845_12

Not on your lists

comp(10849..11775)
-----------------
DNA (927bp)
protein (309aa)
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein id=5041685 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
daunorubicin resistance ATP-binding protein
rifcsplowo2_01_scaffold_26845_13
unknown

Not on your lists

11901..12428
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12508..13089
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein id=5042249 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
haloacid dehalogenase
rifcsplowo2_01_scaffold_26845_15
unknown

Not on your lists

13092..13322
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_16
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13316..13885
-----------------
DNA (570bp)
protein (190aa)
Metal dependent phosphohydrolase id=4400369 bin=GWF2_OP3_38_59 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
metal dependent phosphohydrolase
rifcsplowo2_01_scaffold_26845_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(14053..14244)
-----------------
DNA (192bp)
protein (64aa)
rifcsplowo2_01_scaffold_26845_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(14241..14453)
-----------------
DNA (213bp)
protein (71aa)
rifcsplowo2_01_scaffold_26845_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14594..15949
-----------------
DNA (1356bp)
protein (452aa)
aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXX4_METFV
rifcsplowo2_01_scaffold_26845_20
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16101..17159
-----------------
DNA (1059bp)
protein (353aa)
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA synthetase (ADP-forming) beta subunit n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D1S9_DESAJ
rifcsplowo2_01_scaffold_26845_21
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

17147..18013
-----------------
DNA (867bp)
protein (289aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha 2 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUCD2_ARCFU
sucD-2; succinyl-CoA synthetase subunit alpha
rifcsplowo2_01_scaffold_26845_22
unknown

Not on your lists

18059..19135
-----------------
DNA (1077bp)
protein (359aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_23

Not on your lists

comp(19136..20077)
-----------------
DNA (942bp)
protein (314aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003773F90
hypothetical protein
rifcsplowo2_01_scaffold_26845_24
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

20291..20833
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037902D9
rifcsplowo2_01_scaffold_26845_25
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20826..21299
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035DE931
rifcsplowo2_01_scaffold_26845_26
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

21335..22333
-----------------
DNA (999bp)
protein (333aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=5241313 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_26845_27
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22330..23304
-----------------
DNA (975bp)
protein (325aa)
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S918_9BACT
rifcsplowo2_01_scaffold_26845_28

Not on your lists

comp(23299..23844)
-----------------
DNA (546bp)
protein (182aa)
magnesium and cobalt transporter CorA; K03284 magnesium transporter id=5044651 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
magnesium and cobalt transport protein CorA
Displaying 28 items

View Taxonomy