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rifcsplowo2_01_scaffold_48638

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_48638_1
unknown

Not on your lists

comp(1..66)
-----------------
DNA (66bp)
protein (22aa)

This feature has no annotations

rifcsplowo2_01_scaffold_48638_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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446..778
-----------------
DNA (333bp)
protein (111aa)
translation initiation factor eIF-1A; K03236 translation initiation factor 1A id=5048850 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 1A
rifcsplowo2_01_scaffold_48638_3
unknown

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847..1275
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

rifcsplowo2_01_scaffold_48638_4

Not on your lists

comp(1276..1914)
-----------------
DNA (639bp)
protein (213aa)
Metal dependent phosphohydrolase id=3317751 bin=GWF2_Bacteroidetes_40_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
metal dependent phosphohydrolase
rifcsplowo2_01_scaffold_48638_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(2039..2422)
-----------------
DNA (384bp)
protein (128aa)
Transcriptional regulator, ArsR family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S382_FERPA
ArsR family transcriptional regulator
rifcsplowo2_01_scaffold_48638_6
unknown

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comp(2465..2785)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_48638_7
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2727..3248)
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289204B
hypothetical protein
rifcsplowo2_01_scaffold_48638_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3486..3743
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein id=5045958 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_48638_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3854..4270)
-----------------
DNA (417bp)
protein (139aa)
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L029_THERP
rifcsplowo2_01_scaffold_48638_10
unknown

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comp(4264..4626)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_48638_11
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(4623..5363)
-----------------
DNA (741bp)
protein (247aa)
rifcsplowo2_01_scaffold_48638_12
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5398..5772)
-----------------
DNA (375bp)
protein (125aa)
30S ribosomal protein S8e n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RS8E_THEKO
30S ribosomal protein S8e
rifcsplowo2_01_scaffold_48638_13
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(5825..6271)
-----------------
DNA (447bp)
protein (149aa)
Response regulator receiver sensor signal transduction histidine kinase id=4642873 bin=GWC2_OP3-like_45_7 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
Anti-sigma-factor antagonist
rifcsplowo2_01_scaffold_48638_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

6559..6783
-----------------
DNA (225bp)
protein (75aa)
Like-Sm ribonucleoprotein core id=5800790 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Like-Sm ribonucleoprotein core
rifcsplowo2_01_scaffold_48638_15
unknown

Not on your lists

7072..7530
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

rifcsplowo2_01_scaffold_48638_16

Not on your lists

comp(7430..8104)
-----------------
DNA (675bp)
protein (225aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000381BFF6
rifcsplowo2_01_scaffold_48638_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

9011..11407
-----------------
DNA (2397bp)
protein (799aa)
id=5047464 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Displaying 17 items

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