ggKbase home page

rifcsplowo2_01_scaffold_16083_5

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_41_36

near complete RP 34 / 55 MC: 5 BSCG 6 / 51 ASCG 33 / 38 MC: 3
Location: comp(1812..4337)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037417CB similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 855.0
  • Bit_score: 824
  • Evalue 9.90e-236
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA2_METJA Tax=AR20 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 852.0
  • Bit_score: 785
  • Evalue 9.40e-224
DNA-directed RNA polymerase subunit A'' similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 852.0
  • Bit_score: 785
  • Evalue 1.90e-224

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 2526
ATGGACAAAAACGCATCTTTGTTTCAGGAATACGAAAAACATCTGCCGATAAGTGTTATTGATGAGCTCAAAACACATATTACTGATAAAATAAGTACCGAGCGACTTCAAAAGATACTTGATGTTTTGGTCGAACGATACAATCATGCACAGGTATCAGCAGGAGAAGCAGTTGGGTTGGTAAGTGCAGAAAGTATCGGCGAACCAGGTACTCAGATGTGTATTGCATATGATGAGAAAGTAATGATAAAATATGATGATAAGATCCACATCTCAAAGATTGGTGAATTTGTTGATTCCGCTTTGAATACAACAGAATGTAATGAAGTTGATGGATACCAGTTCTGTGATGCGTATGGTATTTCCGTTCTTGCATTAAACGATAACGAGAAGCTGGAATGGAAAAGTGTTTCTAAACTAAACAGGCACAAGAGTCCTGAAAAATTGATTCACATAAAAACAAAATCAGGAAGGAAAATAACAGCAACTGATTTCCATTCGTTTGTAACAAGAAAGCATAATCAAATTGTTTCAATCAGTGGAAAAGAACTAAGAGTGGGAGATAGAATTCCAGTTATCAAGTATTTACCAGAGCACTGTACTGAAGCAATCAGTGTGTACGAACACGTCGAAATGCCGGCGCAGGATTTTAGAGTAAAAAGAGAATACAGACCAACAAAAATGCTCCCAGCAGAGCTTGCCCTCGATTGGGATTTTGGATGGTTTGTCGGCGCATACCTCAGCGAAGGTTGTGCAACCCAAGGTATAGTATCTATCTCAAATGTAGCCGATTCTTATCTGAATAATGCGAAAAGATTTATCAGCAAAATTGGTCTGGATTACAAAGATAAATTAAATGACAGAGGATTTGCGCAAGGAAGAGACATCATCATTAACTCCTCGTTATTGGCAAGGTTCATGAAGAACACCTGCGGCTCAGGTTCTGCGTTTAAAAAAGTACCAGAACTGGCATTCAGCGCACGAGAGGAGTTTGTTTCCGGACTGTTGAGAGGATACTTTGACGGAGATGGTAATGTAGCTGTGGAGAGAGGAATGCTCAGAGTGTCGTCAAACTCGGAAGAATTGCTTGACGGAATAAAGTTATTATTGAACCGGTTTGAAATATTTGCATCAAAATCAAAAGACCACAAGCAACATTATCTGATGATACCCTCAAAATATGCGCGAACGTTTTTAGAGAAAATTGGCTCTGACATTGATTATAAGAAAGCGGGATTGCAGGAACTGGCACGAAAGCCAAACCATCAGGATTACATTGATAGCATCAGCGGCTTTGACGACGTGCTTGTCTCAGTTTCAAAGAAATTACAATTACCGAGCAGATATGTGAATAGCGCAACGAAACGACAGAAAATTGGAAGAACAGCATTGTCACGACACGTAATAAATTTTGAAAACGAAAGTAGGACGAAAGGTATAGATGTTTCTCAGGAGCTCAATGTACTGAAAACAATGCTTTACTCTGATGTAATATGGGACGAGATTGAATCGATTGAATACGTCTCAAAAAGTCAGGGGTATGTGTACGACCTCACTGTACCTGGACCACATACGTTTGCTACGTTTGATGGAATAATTACCCACAATACCCTCAACACATTTCACTTTGCAGGTGTCTCGGAAATGAATGTCACCGTCGGACTGCCAAGAATCATTGAAATTTTCGATGCACGCAAAGAGATTAAGACGCCGATGATGGAAATTTTTCTAAAAAGCCCATACAACAAGGCAGACAAGATACGTGACGTTGCTTTTGAAATTCGTGAAACTAAAATGAGTGATGTTATACAAGAGATACAAACAGACATCTTCGAGCAGAAGATGGTAATAAAACTCGACACTGTACGTCTGGAAAAGCTTCAGTTGAAACCGGCAGATATAAGCGCGCTTGTTCGTGCAAAGGTCAAAGGCATATCAATGAAAACAGAAGATGCGGCGATTGAAGTAACAGCAAAAGACAATACAGACCCATCTGCAGTAAGCAAACTCAAAGAGAAAATAAAAGTAATTCACATTAAAGGCATTAAAGGAATAACACAGGTATTGCCTGTGAAGCGCGGAGAGGAGTACATCATTCTCACCGCAGGAAGCAACTTCAAGGAGATTATCAAGTTGGAAAAAATTGATCCGAAACGGACAACGACTAACAATATGCACGAGATAGCAGCAGTGCTTGGCATCGAAGCAGCGCGACAGGCGATTATCGATGAAGTAAACAAAGTCATTGACGCGCAAGGCTTAAATATAGACATCCGTCACGTGATGCTCGTCGCAGACACCATGTGTGTGTCCGGTAAAGTTCGAGGGATTACACGATACGGTGTCGTTCGCGAAAAGACAAGCGTGCTTGCTCGTGCAAGTTTTGAAACGCCAATCAAATATTTGATTAATGCGGCACTCGTCGGAGAAATCGATCACCTCCACAGTGTTGTCGAGAACGTCATGATAAATCAACCGGTTCCGATTGGGACAGGATTACCCGGTCTTGTGACAAAGGTGAAGTAA
PROTEIN sequence
Length: 842
MDKNASLFQEYEKHLPISVIDELKTHITDKISTERLQKILDVLVERYNHAQVSAGEAVGLVSAESIGEPGTQMCIAYDEKVMIKYDDKIHISKIGEFVDSALNTTECNEVDGYQFCDAYGISVLALNDNEKLEWKSVSKLNRHKSPEKLIHIKTKSGRKITATDFHSFVTRKHNQIVSISGKELRVGDRIPVIKYLPEHCTEAISVYEHVEMPAQDFRVKREYRPTKMLPAELALDWDFGWFVGAYLSEGCATQGIVSISNVADSYLNNAKRFISKIGLDYKDKLNDRGFAQGRDIIINSSLLARFMKNTCGSGSAFKKVPELAFSAREEFVSGLLRGYFDGDGNVAVERGMLRVSSNSEELLDGIKLLLNRFEIFASKSKDHKQHYLMIPSKYARTFLEKIGSDIDYKKAGLQELARKPNHQDYIDSISGFDDVLVSVSKKLQLPSRYVNSATKRQKIGRTALSRHVINFENESRTKGIDVSQELNVLKTMLYSDVIWDEIESIEYVSKSQGYVYDLTVPGPHTFATFDGIITHNTLNTFHFAGVSEMNVTVGLPRIIEIFDARKEIKTPMMEIFLKSPYNKADKIRDVAFEIRETKMSDVIQEIQTDIFEQKMVIKLDTVRLEKLQLKPADISALVRAKVKGISMKTEDAAIEVTAKDNTDPSAVSKLKEKIKVIHIKGIKGITQVLPVKRGEEYIILTAGSNFKEIIKLEKIDPKRTTTNNMHEIAAVLGIEAARQAIIDEVNKVIDAQGLNIDIRHVMLVADTMCVSGKVRGITRYGVVREKTSVLARASFETPIKYLINAALVGEIDHLHSVVENVMINQPVPIGTGLPGLVTKVK*