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rifcsplowo2_01_scaffold_16083

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16083_1

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comp(125..718)
-----------------
DNA (594bp)
protein (198aa)
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO49278.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5043965 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
rifcsplowo2_01_scaffold_16083_2
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(715..1134)
-----------------
DNA (420bp)
protein (140aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_Woesearch_01
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
rifcsplowo2_01_scaffold_16083_3
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1135..1548)
-----------------
DNA (414bp)
protein (138aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=CG_Woesearch_01
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5043967 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
NusA protein-like, archaeal
rifcsplowo2_01_scaffold_16083_4

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comp(1545..1811)
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BD095
Ribosomal protein L30e (RP-L30e, RPL30) {ECO:0000313|EMBL:AIF00801.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_
50S ribosomal protein L30e
rifcsplowo2_01_scaffold_16083_5
unknown

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comp(1812..4337)
-----------------
DNA (2526bp)
protein (842aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037417CB
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA2_METJA Tax=AR20
DNA-directed RNA polymerase subunit A''
rifcsplowo2_01_scaffold_16083_6
AR9, Woesearchaeaota, DPANN, Archaea

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comp(4337..6907)
-----------------
DNA (2571bp)
protein (857aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=AR9
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_16083_7

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comp(6909..8717)
-----------------
DNA (1809bp)
protein (603aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase id=5800701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_16083_8
AR9, Woesearchaeaota, DPANN, Archaea

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comp(8714..10183)
-----------------
DNA (1470bp)
protein (490aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=AR9
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_16083_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(10176..10493)
-----------------
DNA (318bp)
protein (106aa)
rpoH; DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=RBG_13_Woesearchaeota_36_6_curated
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=2 Tax=Pyrococcus furiosus RepID=RPOH_PYRFU
Displaying 9 items

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