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rifcsplowo2_01_scaffold_1191

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_1191_1
unknown

Not on your lists

comp(195..2051)
-----------------
DNA (1857bp)
protein (619aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1191_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2087..3304)
-----------------
DNA (1218bp)
protein (406aa)
transmembrane_regions id=5094776 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
rifcsplowo2_01_scaffold_1191_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3611..3784
-----------------
DNA (174bp)
protein (58aa)
rifcsplowo2_01_scaffold_1191_4
unknown

Not on your lists

3864..3992
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1191_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3973..6186
-----------------
DNA (2214bp)
protein (738aa)
rifcsplowo2_01_scaffold_1191_6
unknown

Not on your lists

6241..6390
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1191_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

6392..9493
-----------------
DNA (3102bp)
protein (1034aa)
rifcsplowo2_01_scaffold_1191_8
unknown

Not on your lists

9490..9903
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1191_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

9906..12629
-----------------
DNA (2724bp)
protein (908aa)
rifcsplowo2_01_scaffold_1191_10
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

12670..12900
-----------------
DNA (231bp)
protein (77aa)
Putative antitoxin PYCH_18830 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AID5_PYRYC
hypothetical protein
rifcsplowo2_01_scaffold_1191_11

Not on your lists

12879..13259
-----------------
DNA (381bp)
protein (127aa)
VapC-type toxin; K07062 id=5045342 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
twitching motility protein PilT
rifcsplowo2_01_scaffold_1191_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

13263..14027
-----------------
DNA (765bp)
protein (255aa)
rifcsplowo2_01_scaffold_1191_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14178..14333
-----------------
DNA (156bp)
protein (52aa)
rifcsplowo2_01_scaffold_1191_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14485..16419
-----------------
DNA (1935bp)
protein (645aa)
hypothetical protein
rifcsplowo2_01_scaffold_1191_15

Not on your lists

16551..23030
-----------------
DNA (6480bp)
protein (2160aa)
Lipoprotein, putative id=2213246 bin=GWB2_Proteobacteria_55_19 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
peptidase
rifcsplowo2_01_scaffold_1191_16
unknown

Not on your lists

23106..23873
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1191_17
unknown

Not on your lists

comp(23875..25029)
-----------------
DNA (1155bp)
protein (385aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1191_18
unknown

Not on your lists

comp(25102..25656)
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1191_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

25917..27836
-----------------
DNA (1920bp)
protein (640aa)
hypothetical protein id=5047130 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Minimal nucleotidyltransferase fused to HEPN protein
rifcsplowo2_01_scaffold_1191_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

27913..28461
-----------------
DNA (549bp)
protein (183aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXK7_METFV
signal transduction protein with cbs domains
rifcsplowo2_01_scaffold_1191_21

Not on your lists

28605..29522
-----------------
DNA (918bp)
protein (306aa)
Aspartate carbamoyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3IH98_9PLAN
pyrB; aspartate carbamoyltransferase catalytic subunit
rifcsplowo2_01_scaffold_1191_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

29524..30069
-----------------
DNA (546bp)
protein (182aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=PYRI_PYRHO
rifcsplowo2_01_scaffold_1191_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

30074..30976
-----------------
DNA (903bp)
protein (301aa)
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=5241014 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_1191_24

Not on your lists

30973..31581
-----------------
DNA (609bp)
protein (203aa)
Methyltransferase n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DWK8_THIND
tam_[C]; methyltransferase
rifcsplowo2_01_scaffold_1191_25
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31554..32390
-----------------
DNA (837bp)
protein (279aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2)
Dihydroorotate oxidase electron-transfer subunit id=4162445 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rifcsplowo2_01_scaffold_1191_26

Not on your lists

32392..33597
-----------------
DNA (1206bp)
protein (402aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] id=5802107 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
dihydroorotase
rifcsplowo2_01_scaffold_1191_27
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

33587..34213
-----------------
DNA (627bp)
protein (209aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=5799619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_1191_28

Not on your lists

34310..35002
-----------------
DNA (693bp)
protein (231aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5046258 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
rifcsplowo2_01_scaffold_1191_29
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

35143..35583
-----------------
DNA (441bp)
protein (147aa)
Phosphatidylethanolamine-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRR7_9BACT
hypothetical protein
rifcsplowo2_01_scaffold_1191_30
R_SM2F11_46_11, SM2F11, Bacteria

Not on your lists

35587..36117
-----------------
DNA (531bp)
protein (177aa)
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
YHS domain-containing protein
Displaying items 1-30 of 33 in total

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