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rifcsplowo2_01_scaffold_13694

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_13694_1
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..314)
-----------------
DNA (312bp)
protein (104aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5043642 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-tRNA hydrolase
rifcsplowo2_01_scaffold_13694_2
unknown

Not on your lists

514..636
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13694_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(639..1709)
-----------------
DNA (1071bp)
protein (357aa)
Putative leucyl aminopeptidase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIM9_THEBM
leucyl aminopeptidase
rifcsplowo2_01_scaffold_13694_4
GWA2_OD1_42_41_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1786..2634
-----------------
DNA (849bp)
protein (283aa)
alpha/beta hydrolase fold protein id=14430970 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
rifcsplowo2_01_scaffold_13694_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2801..3100
-----------------
DNA (300bp)
protein (100aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6B83C
hypothetical protein
rifcsplowo2_01_scaffold_13694_6
unknown

Not on your lists

comp(3102..3317)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13694_7

Not on your lists

3534..4199
-----------------
DNA (666bp)
protein (222aa)
hypothetical protein
HAD superfamily (subfamily IA) hydrolase, TIGR02253; K07025 putative hydrolase of the HAD superfamily id=5241563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_13694_8
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

4374..4523
-----------------
DNA (150bp)
protein (50aa)
hypothetical protein
Uncharacterized protein id=5800244 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_13694_9
unknown

Not on your lists

comp(4863..5024)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13694_10
unknown

Not on your lists

comp(5021..5185)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13694_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5471..5707)
-----------------
DNA (237bp)
protein (79aa)
rifcsplowo2_01_scaffold_13694_12
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5776..6003)
-----------------
DNA (228bp)
protein (76aa)
YcfA family protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V7_9EURY
YcfA family protein
rifcsplowo2_01_scaffold_13694_13
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6003..6209)
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein family UPF0150 n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V6_9EURY
hypothetical protein
rifcsplowo2_01_scaffold_13694_14
unknown

Not on your lists

comp(6808..6978)
-----------------
DNA (171bp)
protein (57aa)
50S ribosomal protein L37e
rifcsplowo2_01_scaffold_13694_15

Not on your lists

comp(6997..7221)
-----------------
DNA (225bp)
protein (75aa)
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Like-Sm ribonucleoprotein core
rifcsplowo2_01_scaffold_13694_16
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7288..7710)
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein id=5042332 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_13694_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


7788..8168
-----------------
DNA (381bp)
protein (127aa)
30S ribosomal protein S8e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAE7_METIK
30S ribosomal protein S8
rifcsplowo2_01_scaffold_13694_18
unknown

Not on your lists

8398..9255
-----------------
DNA (858bp)
protein (286aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13694_19
unknown

Not on your lists

comp(9313..10497)
-----------------
DNA (1185bp)
protein (395aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13694_20

Not on your lists

10552..11271
-----------------
DNA (720bp)
protein (240aa)
HhH-GPD family protein id=5800764 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_13694_21
unknown

Not on your lists

11274..11432
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

Displaying 21 items

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