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rifcsplowo2_01_scaffold_3193

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_3193_1
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

1..396
-----------------
DNA (396bp)
protein (132aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=5240933 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_3193_2
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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517..3723
-----------------
DNA (3207bp)
protein (1069aa)
carbamoyl phosphate synthase large subunit id=4414135 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
carB; carbamoylphosphate synthase large subunit
rifcsplowo2_01_scaffold_3193_3
unknown

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comp(3729..4094)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3193_4

Not on your lists

4217..5287
-----------------
DNA (1071bp)
protein (357aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD id=4677557 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rifcsplowo2_01_scaffold_3193_5
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5583..6188
-----------------
DNA (606bp)
protein (202aa)
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFH3_THEPS
rifcsplowo2_01_scaffold_3193_6
unknown

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6254..7264
-----------------
DNA (1011bp)
protein (337aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3193_7

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7459..9120
-----------------
DNA (1662bp)
protein (554aa)
BSCG--tRNA--synthetase--arginyl
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=5050148 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Arginyl-tRNA synthetase
rifcsplowo2_01_scaffold_3193_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

9101..10357
-----------------
DNA (1257bp)
protein (419aa)
hypothetical protein id=5045990 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_3193_9

Not on your lists

10410..10736
-----------------
DNA (327bp)
protein (109aa)
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5044188 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA/RNA-binding protein Alba
rifcsplowo2_01_scaffold_3193_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10990..12249)
-----------------
DNA (1260bp)
protein (420aa)
PHP domain protein id=5800577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PHP protein
rifcsplowo2_01_scaffold_3193_11
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12294..12962)
-----------------
DNA (669bp)
protein (223aa)
Methyltransferase type 11 n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMM3_DESVM
methyltransferase type 11
rifcsplowo2_01_scaffold_3193_12
unknown

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13040..13705
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3193_13
unknown

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13702..14145
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3193_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(14152..15501)
-----------------
DNA (1350bp)
protein (450aa)
ASCG--Signal--recognition--particle--54--kDa--protein
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
SRP54-type protein, GTPase protein
rifcsplowo2_01_scaffold_3193_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15503..17428)
-----------------
DNA (1926bp)
protein (642aa)
thrS; threonine--tRNA ligase ThrS (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZ71_CLOA9
rifcsplowo2_01_scaffold_3193_16
unknown

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17723..17926
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3193_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

17934..19808
-----------------
DNA (1875bp)
protein (625aa)
hypothetical protein id=5046588 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_3193_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

20106..22574
-----------------
DNA (2469bp)
protein (823aa)
mg-chelatase subunit chld id=5046589 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_3193_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

22598..23101
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein id=5046590 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_3193_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

23108..23878
-----------------
DNA (771bp)
protein (257aa)
hypothetical protein id=5045836 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_3193_21

Not on your lists

23954..24889
-----------------
DNA (936bp)
protein (312aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] id=5046592 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATPase
rifcsplowo2_01_scaffold_3193_22
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

25204..26055
-----------------
DNA (852bp)
protein (284aa)
hypothetical protein id=5046593 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_3193_23
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(26063..26446)
-----------------
DNA (384bp)
protein (128aa)
PIN domain protein n=1 Tax=mine drainage metagenome RepID=T1B5Y6_9ZZZZ
PIN domain-containing protein
rifcsplowo2_01_scaffold_3193_24
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(26443..26700)
-----------------
DNA (258bp)
protein (86aa)
SpoVT/AbrB family transcription regulator n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HME2_THES4
SpoVT/AbrB family transcription regulator
rifcsplowo2_01_scaffold_3193_25
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(26745..27983)
-----------------
DNA (1239bp)
protein (413aa)
glycosyl transferase family protein id=5048704 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein
rifcsplowo2_01_scaffold_3193_26
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

28075..28341
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZXS4_9CREN
hypothetical protein
rifcsplowo2_01_scaffold_3193_27
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

28320..28727
-----------------
DNA (408bp)
protein (136aa)
rifcsplowo2_01_scaffold_3193_28

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28792..29088
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BHE8_PETMO
hypothetical protein
rifcsplowo2_01_scaffold_3193_29

Not on your lists

29085..29327
-----------------
DNA (243bp)
protein (81aa)
Putative uncharacterized protein id=5046867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_3193_30
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

29596..32211
-----------------
DNA (2616bp)
protein (872aa)
Putative uncharacterized protein id=5048706 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying items 1-30 of 64 in total

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