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rifcsplowo2_01_scaffold_11994

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11994_1
AR5, Aenigmarchaeota, DPANN, Archaea

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1..333
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein; K08971 putative membrane protein id=18248653 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein; K08971 putative membrane protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_11994_2
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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370..624
-----------------
DNA (255bp)
protein (85aa)
Methyltransferase type 11 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EED5_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EEZ93314.1}; TaxID=662760 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
rifcsplowo2_01_scaffold_11994_3
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(634..2373)
-----------------
DNA (1740bp)
protein (580aa)
SecD/SecF/SecDF export membrane protein; K03072 preprotein translocase subunit SecD id=18248651 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
SecD/SecF/SecDF export membrane protein; K03072 preprotein translocase subunit SecD Tax=AR5
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_11994_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(2370..3209)
-----------------
DNA (840bp)
protein (280aa)
Protein translocase subunit SecF id=3922006 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=AR5
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_11994_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

3401..4483
-----------------
DNA (1083bp)
protein (361aa)
geranylgeranyl reductase id=18248649 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
geranylgeranyl reductase Tax=AR5
geranylgeranyl reductase
rifcsplowo2_01_scaffold_11994_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(4520..5458)
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein; K07027 id=18248648 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein; K07027 Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_11994_7
AR5, Aenigmarchaeota, DPANN, Archaea

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5510..6673
-----------------
DNA (1164bp)
protein (388aa)
hypothetical protein id=18248647 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_11994_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6783..7472)
-----------------
DNA (690bp)
protein (230aa)
glycosyl transferase family 2 id=5043061 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version! rbh
glycosyl transferase Tax=AR5
glycosyl transferase
rifcsplowo2_01_scaffold_11994_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

7525..8085
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein id=18248644 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_11994_10
AR5, Aenigmarchaeota, DPANN, Archaea

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8144..8479
-----------------
DNA (336bp)
protein (112aa)
transmembrane oligosaccharyl transferase; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=18248643 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane oligosaccharyl transferase; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=AR5
rifcsplowo2_01_scaffold_11994_11
AR5, Aenigmarchaeota, DPANN, Archaea

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8499..9521
-----------------
DNA (1023bp)
protein (341aa)
transmembrane oligosaccharyl transferase; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=18248643 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane oligosaccharyl transferase; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=AR5
oligosaccharyl transferase STT3 subunit
rifcsplowo2_01_scaffold_11994_12
AR5, Aenigmarchaeota, DPANN, Archaea

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9523..10626
-----------------
DNA (1104bp)
protein (368aa)
oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=18248642 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=AR5
oligosaccharyl transferase STT3 subunit
rifcsplowo2_01_scaffold_11994_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(10623..11735)
-----------------
DNA (1113bp)
protein (371aa)
glycosyltransferase (EC:2.4.1.-) id=5043066 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
glycosyltransferase (EC:2.4.1.-) Tax=AR5
group 1 glycosyl transferase
rifcsplowo2_01_scaffold_11994_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11986..13302
-----------------
DNA (1317bp)
protein (439aa)
radical SAM protein id=18248639 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
radical SAM protein Tax=AR5
radical SAM protein
rifcsplowo2_01_scaffold_11994_15

Not on your lists

13401..14684
-----------------
DNA (1284bp)
protein (428aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=5043068 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version! rbh
UDPglucose 6-dehydrogenase {ECO:0000313|EMBL:KHO47473.1}; EC=1.1.1.22 {ECO:0000313|EMBL:KHO47473.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
UDP-glucose dehydrogenase (EC:1.1.1.22)
rifcsplowo2_01_scaffold_11994_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14681..15493
-----------------
DNA (813bp)
protein (271aa)
translation initiation factor eIF2B subunit; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] id=18248637 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
translation initiation factor eIF2B subunit; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=AR5
translation initiation factor eIF2B subunit
rifcsplowo2_01_scaffold_11994_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15490..15966
-----------------
DNA (477bp)
protein (159aa)
rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=5043070 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
NAD-dependent epimerase/dehydratase Tax=AR5
UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase
rifcsplowo2_01_scaffold_11994_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15963..16355
-----------------
DNA (393bp)
protein (131aa)
rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=5043070 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
NAD-dependent epimerase/dehydratase Tax=AR5
NAD-dependent epimerase/dehydratase
rifcsplowo2_01_scaffold_11994_19
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

16400..17353
-----------------
DNA (954bp)
protein (318aa)
hypothetical protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00036B35CC
deduced dNDP-hexose 4 C6-dehydratase
rifcsplowo2_01_scaffold_11994_20
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

17367..18293
-----------------
DNA (927bp)
protein (309aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
putative formyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
Glycoside formyltransferase id=4919081 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rifcsplowo2_01_scaffold_11994_21
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

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18307..19413
-----------------
DNA (1107bp)
protein (369aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
rifcsplowo2_01_scaffold_11994_22

Not on your lists

19424..20545
-----------------
DNA (1122bp)
protein (374aa)
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] id=18248634 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KHO47469.1}; EC=5.1.3.14 {ECO:0000313|EMBL:KHO47469.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
UDP-N-acetylglucosamine 2-epimerase
rifcsplowo2_01_scaffold_11994_23
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

20542..21375
-----------------
DNA (834bp)
protein (278aa)
methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=18248633 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=AR5
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
rifcsplowo2_01_scaffold_11994_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

21380..21937
-----------------
DNA (558bp)
protein (186aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2); K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] id=18248632 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2); K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=AR5
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
rifcsplowo2_01_scaffold_11994_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

21955..23238
-----------------
DNA (1284bp)
protein (428aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] id=18248631 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=AR5
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
rifcsplowo2_01_scaffold_11994_26
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

23246..23956
-----------------
DNA (711bp)
protein (237aa)
GD21748 gene product from transcript GD21748-RA; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=5043076 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
wcaA; Dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83) Tax=AR5
wcaA; Dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
rifcsplowo2_01_scaffold_11994_27
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

23985..25559
-----------------
DNA (1575bp)
protein (525aa)
oligosaccharyl transferase STT3 subunit id=18248629 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
oligosaccharyl transferase STT3 subunit Tax=AR5
oligosaccharyl transferase STT3 subunit
rifcsplowo2_01_scaffold_11994_28
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

25614..27074
-----------------
DNA (1461bp)
protein (487aa)
glycosyl transferase family protein id=18248626 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
glycosyl transferase family protein Tax=AR5
glycoside hydrolase
rifcsplowo2_01_scaffold_11994_29
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27209..28192)
-----------------
DNA (984bp)
protein (328aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376477D
radical SAM domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Radical SAM domain-containing protein
Displaying 29 items

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