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rifcsplowo2_01_scaffold_27768

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_27768_1
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3..2354)
-----------------
DNA (2352bp)
protein (784aa)
hypothetical protein id=18248129 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_27768_2
unknown

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2427..2654
-----------------
DNA (228bp)
protein (76aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJC6_9ZZZZ id=5103633 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJC6_9ZZZZ Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_27768_3

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2655..3056
-----------------
DNA (402bp)
protein (134aa)
Protein containing Nucleotide binding protein, PINc domain n=1 Tax=sediment metagenome RepID=D9PJC5_9ZZZZ
Protein containing Nucleotide binding protein, PINc domain {ECO:0000313|EMBL:EFK96340.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metageno
Protein containing Nucleotide binding protein, PINc protein
rifcsplowo2_01_scaffold_27768_4
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3169..3351)
-----------------
DNA (183bp)
protein (61aa)
alias=gwa2_scaffold_192_139 id=18248128 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_192_139 Tax=AR5
rifcsplowo2_01_scaffold_27768_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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3751..3960
-----------------
DNA (210bp)
protein (70aa)
Uncharacterized protein id=5048298 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_27768_6

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3954..4319
-----------------
DNA (366bp)
protein (122aa)
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PIN protein
PIN protein {ECO:0000313|EMBL:AJF60425.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_27768_7
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4381..4518)
-----------------
DNA (138bp)
protein (46aa)
PAS/PAC sensor signal transduction histidine kinase id=18248127 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
PAS/PAC sensor signal transduction histidine kinase Tax=AR5
rifcsplowo2_01_scaffold_27768_8
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4562..5290)
-----------------
DNA (729bp)
protein (243aa)
transmembrane_regions id=18248126 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_27768_9
unknown

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comp(5492..5995)
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27768_10
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(6007..6927)
-----------------
DNA (921bp)
protein (307aa)
transmembrane_regions id=18248125 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_27768_11
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(7162..8013)
-----------------
DNA (852bp)
protein (284aa)
type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=5042173 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=AR5
Flp pilus assembly protein TadC
rifcsplowo2_01_scaffold_27768_12
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(8142..8972)
-----------------
DNA (831bp)
protein (277aa)
type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=18248123 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=AR5
type II secretion system protein
rifcsplowo2_01_scaffold_27768_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(9082..9741)
-----------------
DNA (660bp)
protein (220aa)
circadian clock protein KaiC (EC:2.7.11.1) Tax=AR5
kaiC1; circadian clock protein KaiC; K08482 circadian clock protein KaiC id=5042171 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsplowo2_01_scaffold_27768_14
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(9932..11410)
-----------------
DNA (1479bp)
protein (493aa)
ATPase, type IV secretory pathway VirB11 component like protein id=18248121 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
ATPase, type IV secretory pathway VirB11 component like protein Tax=AR5
type II secretion system protein E
Displaying 14 items

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