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rifcsplowo2_01_scaffold_24006

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_24006_1
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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1..519
-----------------
DNA (519bp)
protein (173aa)
id=4379354 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4379354 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_24006_2
unknown

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comp(628..804)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24006_3
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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980..1360
-----------------
DNA (381bp)
protein (127aa)
id=5048700 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_24006_4

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comp(1298..1441)
-----------------
DNA (144bp)
protein (48aa)
Marine sediment metagenome DNA, contig: S01H1_S03205 {ECO:0000313|EMBL:GAF89404.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_24006_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

1749..4274
-----------------
DNA (2526bp)
protein (842aa)
proteophosphoglycan 5 id=18248218 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
proteophosphoglycan 5 Tax=AR5
rifcsplowo2_01_scaffold_24006_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

4438..6396
-----------------
DNA (1959bp)
protein (653aa)
proteophosphoglycan 5 id=18248218 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
proteophosphoglycan 5 Tax=AR5
cell wall surface anchor family protein
rifcsplowo2_01_scaffold_24006_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

6521..8635
-----------------
DNA (2115bp)
protein (705aa)
proteophosphoglycan 5 id=18248218 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
proteophosphoglycan 5 Tax=AR5
rifcsplowo2_01_scaffold_24006_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

8797..9354
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein; K07572 putative nucleotide binding protein id=18248219 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein; K07572 putative nucleotide binding protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_24006_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


9557..9805
-----------------
DNA (249bp)
protein (83aa)
50S ribosomal protein L21e id=18248221 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L21e Tax=AR5
50S ribosomal protein L21
rifcsplowo2_01_scaffold_24006_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9810..10139
-----------------
DNA (330bp)
protein (110aa)
RNA polymerase rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=18248222 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RNA polymerase rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_24006_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10242..11042
-----------------
DNA (801bp)
protein (267aa)
hypothetical protein id=18248223 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_24006_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11065..11754
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein id=18248226 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
hypothetical protein Tax=AR5
Hypothetical protein
rifcsplowo2_01_scaffold_24006_13
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11862..12578)
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein Tax=GWA2_OD1_40_9
rifcsplowo2_01_scaffold_24006_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(12589..13812)
-----------------
DNA (1224bp)
protein (408aa)
TIGR01213 family protein id=18248228 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
TIGR01213 family protein Tax=AR5
TIGR01213 family protein
rifcsplowo2_01_scaffold_24006_15
unknown

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comp(13846..14139)
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24006_16
unknown

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14549..15232
-----------------
DNA (684bp)
protein (228aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24006_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15264..15926
-----------------
DNA (663bp)
protein (221aa)
ribonuclease HII id=18248232 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribonuclease HII Tax=AR5
ribonuclease HII
rifcsplowo2_01_scaffold_24006_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15931..16203
-----------------
DNA (273bp)
protein (91aa)
alias=gwa2_scaffold_521_43 id=18248233 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_521_43 Tax=AR5
rifcsplowo2_01_scaffold_24006_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


16344..17633
-----------------
DNA (1290bp)
protein (430aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5044305 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version! rbh
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=AR5
aspartyl-tRNA synthetase
rifcsplowo2_01_scaffold_24006_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

17640..17918
-----------------
DNA (279bp)
protein (93aa)
id=18248235 bin=AR5_curated_draft tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
rifcsplowo2_01_scaffold_24006_21
unknown

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18013..18300
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24006_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(18313..18558)
-----------------
DNA (246bp)
protein (82aa)
YbaK / prolyl-tRNA synthetases associated domain containing protein id=18248236 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
YbaK / prolyl-tRNA synthetases associated domain containing protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_24006_23
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(18555..18680)
-----------------
DNA (126bp)
protein (42aa)
YbaK / prolyl-tRNA synthetases associated domain containing protein Tax=AR5
YbaK / prolyl-tRNA synthetases associated domain containing protein id=18248236 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsplowo2_01_scaffold_24006_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

18799..20436
-----------------
DNA (1638bp)
protein (546aa)
hypothetical protein id=18248237 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
Displaying 24 items

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