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rifcsplowo2_01_scaffold_12621

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12621_1

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comp(1..855)
-----------------
DNA (855bp)
protein (285aa)
NAD-dependent epimerase/dehydratase id=5043095 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KHO47446.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
NAD-dependent epimerase/dehydratase
rifcsplowo2_01_scaffold_12621_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(869..2140)
-----------------
DNA (1272bp)
protein (424aa)
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=18248610 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=AR5
histidinol-phosphate phosphatase family domain/HAD-superfamily hydrolase, subfamily IIIA (EC:3.1.3.-)
rifcsplowo2_01_scaffold_12621_3
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(2146..2724)
-----------------
DNA (579bp)
protein (193aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] id=18248609 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=AR5
gmhA1; phosphoheptose isomerase (EC:5.3.1.28)
rifcsplowo2_01_scaffold_12621_4
GWC2_OD1_53_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(2724..3680)
-----------------
DNA (957bp)
protein (319aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] id=5043098 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KKW35003.1}; TaxID=1618986 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_53_7.;"
kinase, galactokinase/mevalonate kinase
rifcsplowo2_01_scaffold_12621_5
AR5, Aenigmarchaeota, DPANN, Archaea

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3827..4654
-----------------
DNA (828bp)
protein (276aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] id=18248607 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=AR5
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
rifcsplowo2_01_scaffold_12621_6

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4769..5422
-----------------
DNA (654bp)
protein (218aa)
beta-lactamase id=5043102 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Hydrolase {ECO:0000313|EMBL:KHO47439.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hydrolase
rifcsplowo2_01_scaffold_12621_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5432..5803)
-----------------
DNA (372bp)
protein (124aa)
seg id=18248603 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
seg Tax=AR5
rifcsplowo2_01_scaffold_12621_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5813..6652)
-----------------
DNA (840bp)
protein (280aa)
hypothetical protein id=18248602 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_12621_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6643..7221)
-----------------
DNA (579bp)
protein (193aa)
alias=gwa2_scaffold_241_108 id=18248601 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_241_108 Tax=AR5
rifcsplowo2_01_scaffold_12621_10

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7441..9138
-----------------
DNA (1698bp)
protein (566aa)
PHP domain protein id=4935158 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
DNA polymerase family X {ECO:0000313|EMBL:KHO47435.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
PHP domain-containing protein
rifcsplowo2_01_scaffold_12621_11
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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9173..9424
-----------------
DNA (252bp)
protein (84aa)
id=4935159 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4935159 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_12621_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(9421..10437)
-----------------
DNA (1017bp)
protein (339aa)
RCL1; RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4); K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] Tax=AR5
RNA 3'-phosphate cyclase id=4935160 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria) rbh
RNA 3'-terminal-phosphate cyclase
rifcsplowo2_01_scaffold_12621_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10542..10769
-----------------
DNA (228bp)
protein (76aa)
Transcription regulator Rrf2-like id=18248596 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Transcription regulator Rrf2-like Tax=AR5
rifcsplowo2_01_scaffold_12621_14
unknown

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comp(10763..11251)
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12621_15
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(11297..12538)
-----------------
DNA (1242bp)
protein (414aa)
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor id=18248594 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor Tax=AR5
beta-lactamase domain-containing protein
rifcsplowo2_01_scaffold_12621_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(12535..13299)
-----------------
DNA (765bp)
protein (255aa)
Xylose isomerase domain-containing protein TIM barrel id=18248593 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
Xylose isomerase domain-containing protein TIM barrel Tax=AR5
xylose isomerase domain-containing protein
rifcsplowo2_01_scaffold_12621_17
unknown

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13738..13890
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12621_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13887..14570
-----------------
DNA (684bp)
protein (228aa)
racD-1; aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13] id=18248591 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
racD-1; aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13] Tax=AR5
aspartate racemase
rifcsplowo2_01_scaffold_12621_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14563..15279
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein id=18248590 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_12621_20

Not on your lists

15357..15881
-----------------
DNA (525bp)
protein (175aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=18248589 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Displaying 20 items

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