ggKbase home page

rifcsplowo2_01_scaffold_18222

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18222_1
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

3..428
-----------------
DNA (426bp)
protein (142aa)
protoporphyrinogen oxidase HemK id=5040669 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
protoporphyrinogen oxidase HemK Tax=AR5
protoporphyrinogen oxidase HemK
rifcsplowo2_01_scaffold_18222_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(382..762)
-----------------
DNA (381bp)
protein (127aa)
putative response regulator receiver protein id=18248944 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative response regulator receiver protein Tax=AR5
Nitrogen regulation protein NR(I)
rifcsplowo2_01_scaffold_18222_3
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

856..1650
-----------------
DNA (795bp)
protein (265aa)
GTPase; K06944 id=18248943 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
GTPase; K06944 Tax=AR5
putative GTPase of the OBG/HflX superfamily
rifcsplowo2_01_scaffold_18222_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

1705..1863
-----------------
DNA (159bp)
protein (53aa)
transmembrane_regions id=18248942 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_18222_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

1900..2541
-----------------
DNA (642bp)
protein (214aa)
hypothetical protein LOC100365100 id=18248940 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein LOC100365100 Tax=AR5
uncharacterized LOC760834
rifcsplowo2_01_scaffold_18222_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(2545..3165)
-----------------
DNA (621bp)
protein (207aa)
transmembrane_regions id=18248938 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_18222_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

3497..4660
-----------------
DNA (1164bp)
protein (388aa)
hypothetical protein id=18248937 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_18222_8
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

comp(4657..5172)
-----------------
DNA (516bp)
protein (172aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
Isopentenyl-diphosphate Delta-isomerase id=2583299 bin=GWF2_CPR3_35_18 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GWF2_CPR3_35_18 organism_group=CPR3
NUDIX hydrolase
rifcsplowo2_01_scaffold_18222_9
unknown

Not on your lists

comp(5196..5660)
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18222_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

5920..6744
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein id=18248936 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_18222_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6806..7387)
-----------------
DNA (582bp)
protein (194aa)
phosphoglycerate mutase (EC:5.4.2.1); K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=18248935 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
phosphoglycerate mutase (EC:5.4.2.1); K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=AR5
GpmB; fructose-2,6-bisphosphatase
rifcsplowo2_01_scaffold_18222_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

7438..8976
-----------------
DNA (1539bp)
protein (513aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48); K07739 elongator complex protein 3 [EC:2.3.1.48] id=18248934 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
histone acetyltransferase, ELP3 family (EC:2.3.1.48); K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=AR5
coproporphyrinogen III oxidase
rifcsplowo2_01_scaffold_18222_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9080..9316
-----------------
DNA (237bp)
protein (79aa)
coiled-coil id=18248932 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
coiled-coil Tax=AR5
rifcsplowo2_01_scaffold_18222_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(9320..10009)
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein id=5040656 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_18222_15
unknown

Not on your lists

comp(10076..10465)
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18222_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(10512..12185)
-----------------
DNA (1674bp)
protein (558aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=5040655 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=AR5
threonyl-tRNA synthetase (EC:6.1.1.3)
rifcsplowo2_01_scaffold_18222_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(12389..13093)
-----------------
DNA (705bp)
protein (235aa)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily id=18248929 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=AR5
HAD-superfamily hydrolase
rifcsplowo2_01_scaffold_18222_18
unknown

Not on your lists

13375..13569
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18222_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13603..14775
-----------------
DNA (1173bp)
protein (391aa)
tyrosine/nicotianamine aminotransferase; K14260 alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] id=18248928 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
tyrosine/nicotianamine aminotransferase; K14260 alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] Tax=AR5
tyrosine/nicotianamine aminotransferase
rifcsplowo2_01_scaffold_18222_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14806..15327
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=18248926 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_18222_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15368..16855
-----------------
DNA (1488bp)
protein (496aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000368A449
rifcsplowo2_01_scaffold_18222_22

Not on your lists

comp(16857..17891)
-----------------
DNA (1035bp)
protein (345aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
tRNA-modifying enzyme id=18248925 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
tRNA-modifying enzyme
rifcsplowo2_01_scaffold_18222_23
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

17936..18769
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein; K07055 tRNA wybutosine-synthesizing protein 2 [EC:2.1.1.-] id=5040649 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein; K07055 tRNA wybutosine-synthesizing protein 2 [EC:2.1.1.-] Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_18222_24
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18786..19229)
-----------------
DNA (444bp)
protein (148aa)
Tax=RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated
rifcsplowo2_01_scaffold_18222_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(19248..19349)
-----------------
DNA (102bp)
protein (34aa)
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] id=18248923 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] Tax=AR5
Displaying 25 items

View Taxonomy