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rifcsplowo2_01_scaffold_26834

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_26834_1
unknown

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3..296
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26834_2

Not on your lists

comp(340..537)
-----------------
DNA (198bp)
protein (66aa)
rRNA pseudouridine synthase; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=5042061 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
rRNA pseudouridine synthase
rifcsplowo2_01_scaffold_26834_3
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(616..1257)
-----------------
DNA (642bp)
protein (214aa)
Putative membrane protein id=18248009 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Putative membrane protein Tax=AR5
rifcsplowo2_01_scaffold_26834_4

Not on your lists

comp(1390..1680)
-----------------
DNA (291bp)
protein (97aa)
50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=18248008 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
50S ribosomal protein L44e
rifcsplowo2_01_scaffold_26834_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1821..2207
-----------------
DNA (387bp)
protein (129aa)
phosphohydrolase Tax=CG_Aenigma_01
Uncharacterized Nudix hydrolase yvcI id=2184812 bin=GWE2_CPR3_35_7 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
rifcsplowo2_01_scaffold_26834_6
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(2204..3571)
-----------------
DNA (1368bp)
protein (456aa)
pyrrolo-quinoline quinone id=18248007 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
pyrrolo-quinoline quinone Tax=AR5
PQQ repeat protein
rifcsplowo2_01_scaffold_26834_7
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3605..4135)
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein (Fragment) id=18248006 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein (Fragment) Tax=AR5
rifcsplowo2_01_scaffold_26834_8
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4216..5547)
-----------------
DNA (1332bp)
protein (444aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=18248005 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_26834_9
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

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comp(5571..6074)
-----------------
DNA (504bp)
protein (168aa)
AAA domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RU60_RHIET
AAA domain-containing protein Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
AAA domain-containing protein
rifcsplowo2_01_scaffold_26834_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(6136..6582)
-----------------
DNA (447bp)
protein (149aa)
30S ribosomal protein S15/S13e id=4922344 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=AR5
rps15p; 30S ribosomal protein S15
rifcsplowo2_01_scaffold_26834_11
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(6582..6695)
-----------------
DNA (114bp)
protein (38aa)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=18248003 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=AR5
rifcsplowo2_01_scaffold_26834_12
unknown

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comp(6692..6787)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26834_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(6784..7383)
-----------------
DNA (600bp)
protein (200aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] id=18248002 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] Tax=AR5
o-sialoglycoprotein endopeptidase (EC:3.4.24.57)
rifcsplowo2_01_scaffold_26834_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(7988..9208)
-----------------
DNA (1221bp)
protein (407aa)
geranylgeranyl reductase id=18248000 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
geranylgeranyl reductase Tax=AR5
geranylgeranyl reductase
rifcsplowo2_01_scaffold_26834_15
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9302..10072
-----------------
DNA (771bp)
protein (257aa)
hypothetical protein id=18247999 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
membrane protein
rifcsplowo2_01_scaffold_26834_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10122..10274
-----------------
DNA (153bp)
protein (51aa)
alias=gwa2_scaffold_192_12 id=18247998 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_192_12 Tax=AR5
rifcsplowo2_01_scaffold_26834_17
AR5, Aenigmarchaeota, DPANN, Archaea

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10274..12685
-----------------
DNA (2412bp)
protein (804aa)
SMC domain-containing protein; K03529 chromosome segregation protein Tax=AR5
SMC domain-containing protein; K03529 chromosome segregation protein id=18247997 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
SMC domain-containing protein
rifcsplowo2_01_scaffold_26834_18
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

12682..13251
-----------------
DNA (570bp)
protein (190aa)
RBBP; Putative esterase (EC:3.-.-.-)
esterase; K07002 Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated
esterase; K07002 id=15191480 bin=GWC1_OP11_49_16_COMPLETE species=Rickettsia bellii genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rifcsplowo2_01_scaffold_26834_19
CG_Pacearch_06, Pacearchaeota, Archaea

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13248..13757
-----------------
DNA (510bp)
protein (170aa)
bifunctional deaminase-reductase domain-containing protein Tax=CG_Pacearch_06
dihydrofolate reductase-like protein id=5042048 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
dihydrofolate reductase-like protein
rifcsplowo2_01_scaffold_26834_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13760..14494
-----------------
DNA (735bp)
protein (245aa)
condensin subunit ScpA; K05896 segregation and condensation protein A id=18247995 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
condensin subunit ScpA; K05896 segregation and condensation protein A Tax=AR5
chromosome segregation and condensation protein ScpA
rifcsplowo2_01_scaffold_26834_21
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14551..14766
-----------------
DNA (216bp)
protein (72aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B id=18247994 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=AR5
rifcsplowo2_01_scaffold_26834_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14772..14957
-----------------
DNA (186bp)
protein (62aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=AR5
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B id=18247994 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsplowo2_01_scaffold_26834_23
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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15009..15677
-----------------
DNA (669bp)
protein (223aa)
alias=gwe2_scaffold_287_86 Tax=CG_Nomura_01
alias=gwe2_scaffold_287_86 id=15190247 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rifcsplowo2_01_scaffold_26834_24
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(15678..16331)
-----------------
DNA (654bp)
protein (218aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=18247993 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=AR5
tmk; thymidylate kinase
rifcsplowo2_01_scaffold_26834_25

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16419..17108
-----------------
DNA (690bp)
protein (230aa)
glycosyl transferase family 2 id=5042044 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Glycosyl transferase family 2 {ECO:0000313|EMBL:KHO47995.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
glycosyl transferase family 2
rifcsplowo2_01_scaffold_26834_26
AR5, Aenigmarchaeota, DPANN, Archaea

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17228..17368
-----------------
DNA (141bp)
protein (47aa)
transmembrane_regions id=18247991 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
Displaying 26 items

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