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rifcsplowo2_01_scaffold_49805

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_49805_1
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(2..4048)
-----------------
DNA (4047bp)
protein (1349aa)
Uncharacterized protein id=18248250 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein Tax=AR5
rifcsplowo2_01_scaffold_49805_2

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comp(4103..5953)
-----------------
DNA (1851bp)
protein (617aa)
Cell wall surface anchored protein {ECO:0000313|EMBL:KKS53555.1}; TaxID=1618822 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_28.;"
PKD domain-containing protein id=5044319 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rifcsplowo2_01_scaffold_49805_3
unknown

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6077..6481
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

rifcsplowo2_01_scaffold_49805_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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7280..7801
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Uncharacterized protein id=5240692 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_49805_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7779..8075
-----------------
DNA (297bp)
protein (99aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Putative uncharacterized protein id=4996879 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
rifcsplowo2_01_scaffold_49805_6
unknown

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8079..8237
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_49805_7
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(8240..8932)
-----------------
DNA (693bp)
protein (231aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=AR5
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=18248248 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Suspect SCG annotation. See neighboring gene [rifcsplowo2_01_scaffold_49805_8].
methionyl-tRNA synthetase
rifcsplowo2_01_scaffold_49805_8
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(8949..10130)
-----------------
DNA (1182bp)
protein (394aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=18248248 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=AR5
methionyl-tRNA synthetase (EC:6.1.1.10)
rifcsplowo2_01_scaffold_49805_9

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comp(10133..11242)
-----------------
DNA (1110bp)
protein (370aa)
Tryptophan--tRNA ligase id=3672836 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tryptophan-tRNA ligase {ECO:0000313|EMBL:KKS53561.1}; TaxID=1618822 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_28.;"
trpS; tryptophanyl-tRNA synthetase
rifcsplowo2_01_scaffold_49805_10
CG_CPR10_02, CG_CPR10, Bacteria

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comp(11239..11700)
-----------------
DNA (462bp)
protein (154aa)
racD-1; aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13] Tax=CG_CPR10_02
amino acid racemase (EC:5.1.1.-)
amino acid racemase n=1 Tax=Bacillus mojavensis RepID=UPI0002884F14
rifcsplowo2_01_scaffold_49805_11
CG_CPR10_02, CG_CPR10, Bacteria

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comp(11775..12050)
-----------------
DNA (276bp)
protein (92aa)
racD-1; aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13] Tax=CG_CPR10_02
rifcsplowo2_01_scaffold_49805_12
AR5, Aenigmarchaeota, DPANN, Archaea

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12242..13162
-----------------
DNA (921bp)
protein (307aa)
alias=gwa2_scaffold_521_54 id=18248245 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_521_54 Tax=AR5
rifcsplowo2_01_scaffold_49805_13
AR5, Aenigmarchaeota, DPANN, Archaea

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13159..13728
-----------------
DNA (570bp)
protein (190aa)
alias=gwa2_scaffold_521_54 id=18248245 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_521_54 Tax=AR5
rifcsplowo2_01_scaffold_49805_14
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(13996..15855)
-----------------
DNA (1860bp)
protein (620aa)
integral membrane transport protein id=18248244 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
integral membrane transport protein Tax=AR5
amino acid permease
rifcsplowo2_01_scaffold_49805_15
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(15922..16659)
-----------------
DNA (738bp)
protein (246aa)
transcriptional regulator TrmB id=18248243 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
transcriptional regulator TrmB Tax=AR5
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_49805_16
AR5, Aenigmarchaeota, DPANN, Archaea

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16775..17350
-----------------
DNA (576bp)
protein (192aa)
alias=gwa2_scaffold_521_51 id=18248242 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_521_51 Tax=AR5
Displaying 16 items

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