ggKbase home page

rifcsplowo2_01_scaffold_36619_15

Organism: RIFCSPLOWO2_01_FULL_Aenigmarchaeota_48_10

near complete RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: 8985..9545

Top 3 Functional Annotations

Value Algorithm Source
transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=18248891 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 354
  • Evalue 8.50e-95
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 186.0
  • Bit_score: 352
  • Evalue 3.40e-94
TATA-box binding family protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 177.0
  • Bit_score: 178
  • Evalue 1.80e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR5 → Archaea

Sequences

DNA sequence
Length: 561
GTGGCCGAAAAAATTGGACAGATACAGAAAATCAAGATTGAAAACGTCGTCGCTTCTACGGACATAAAGAAGATAATTTCGCTTGACAAGCTGCTCAACGTGCTTGAATCGAGCGAATACGAGCCCGAGCAGTTCCCGGGCCTTGTTTACAGGCTTGATAATCCCAAAGTCGCGACTCTTATATTTAGGTCTGGAAAAATAATCTGCGTCGGCGCGCGGAGCACTGCCGCGGCAAAAGAGGCGCTGAAGAAAACAGTCAGGAATATCAAGAAAATAGGGATAAGATTCAACGAGAACAACCTGAAGGTGAAGATAGAGAACATAGTTGTTGCAGTGAACCTCGGGCGCGACCTGAATCTGGATCAGCTCGCGTTCCAGCTGGAGAACAGTGAATACGAGCCCGAGCAATTCCCGGGGCTTGTCTACCGCATATACGACCCGAAGGTCGCTTTCCTGCTTTTCAGCTCGGGAAGGGTTGTCTGCGCAGGCGCGAAGAGCCTTGACAGCGTGAAAAAAGCTGTTGCAAAGCTCGAGGCTCAGCTCAAGGCATTGAAGAGCTAG
PROTEIN sequence
Length: 187
VAEKIGQIQKIKIENVVASTDIKKIISLDKLLNVLESSEYEPEQFPGLVYRLDNPKVATLIFRSGKIICVGARSTAAAKEALKKTVRNIKKIGIRFNENNLKVKIENIVVAVNLGRDLNLDQLAFQLENSEYEPEQFPGLVYRIYDPKVAFLLFSSGRVVCAGAKSLDSVKKAVAKLEAQLKALKS*