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rifcsplowo2_01_scaffold_36619

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_36619_1
AR5, Aenigmarchaeota, DPANN, Archaea

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197..1558
-----------------
DNA (1362bp)
protein (454aa)
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:3.5.1.1); K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=18248881 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:3.5.1.1); K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=AR5
glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsplowo2_01_scaffold_36619_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

1575..3359
-----------------
DNA (1785bp)
protein (595aa)
aspartyl-tRNA(Asn) amidotransferase subunit beta; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=18248882 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
aspartyl-tRNA(Asn) amidotransferase subunit beta; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=AR5
aspartyl-tRNA(Asn) amidotransferase subunit beta
rifcsplowo2_01_scaffold_36619_3
AR5, Aenigmarchaeota, DPANN, Archaea

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3405..3788
-----------------
DNA (384bp)
protein (128aa)
transmembrane_regions id=18248883 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_36619_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(3990..4334)
-----------------
DNA (345bp)
protein (115aa)
transmembrane_regions id=18248884 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_36619_5
unknown

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comp(4477..4857)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_36619_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(4863..5216)
-----------------
DNA (354bp)
protein (118aa)
id=18248446 bin=AR5_curated_draft tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
rifcsplowo2_01_scaffold_36619_7
unknown

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comp(5284..5631)
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

rifcsplowo2_01_scaffold_36619_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

5723..6493
-----------------
DNA (771bp)
protein (257aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=18248887 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=AR5
methylthioadenosine phosphorylase (EC:2.4.2.28)
rifcsplowo2_01_scaffold_36619_9
unknown

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6497..6751
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsplowo2_01_scaffold_36619_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6752..6940)
-----------------
DNA (189bp)
protein (63aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] id=5040613 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-3-methyladenine glycosylase Tax=AR5
HhH-GPD family protein
rifcsplowo2_01_scaffold_36619_11

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comp(7049..7357)
-----------------
DNA (309bp)
protein (103aa)
iron-sulfur cluster assembly protein HesB
DNA-3-methyladenine glycosylase id=18248888 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KHO47723.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsplowo2_01_scaffold_36619_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(7363..8043)
-----------------
DNA (681bp)
protein (227aa)
universal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein id=18248889 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
universal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein Tax=AR5
universal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein
rifcsplowo2_01_scaffold_36619_13
unknown

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8334..8429
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

rifcsplowo2_01_scaffold_36619_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8430..8828)
-----------------
DNA (399bp)
protein (133aa)
hypothetical protein id=18248890 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_36619_15

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8985..9545
-----------------
DNA (561bp)
protein (187aa)
transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=18248891 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box binding family protein
rifcsplowo2_01_scaffold_36619_16
unknown

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9616..10122
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

Displaying 16 items

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