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rifcsplowo2_01_scaffold_2465

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2465_1
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(1..102)
DNA (102bp) protein (34aa)
Activator of Hsp90 ATPase 1 family protein Tax=RBG_13_Berkelbacteria_40_8_curated
hypothetical protein id=14632276 bin=bin9_gal15 species=Leptospira vanthielii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin9_gal15 organism_group=GAL15
rifcsplowo2_01_scaffold_2465_2

Not on your lists

746..985
DNA (240bp) protein (80aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH
rifcsplowo2_01_scaffold_2465_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

978..2465
DNA (1488bp) protein (496aa)
DNA-directed RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5044123 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_2465_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

2466..4268
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5044122 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_2465_5
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4269..6839
DNA (2571bp) protein (857aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5044121 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_2465_6
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

6841..7974
DNA (1134bp) protein (378aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5044120 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit A''
rifcsplowo2_01_scaffold_2465_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

7958..8200
DNA (243bp) protein (81aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 id=5044119 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Ribosomal protein L7Ae/L30e/S12e/Gadd45 Tax=AR18
rifcsplowo2_01_scaffold_2465_8
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8203..8610
DNA (408bp) protein (136aa)
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5044118 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=AR18
NusA family KH domain-containing protein
rifcsplowo2_01_scaffold_2465_9
unknown

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8641..9057
DNA (417bp) protein (139aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2465_10

Not on your lists

comp(9127..9951)
DNA (825bp) protein (275aa)
hypothetical protein id=5051051 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53188.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_2465_11
unknown

Not on your lists

comp(9987..10697)
DNA (711bp) protein (237aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2465_12

Not on your lists

comp(10735..12927)
DNA (2193bp) protein (731aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5041922 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 rbh
Cu2+-exporting ATPase {ECO:0000313|EMBL:KHO47350.1}; EC=3.6.3.4 {ECO:0000313|EMBL:KHO47350.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
copper-translocating P-type ATPase
rifcsplowo2_01_scaffold_2465_13
R_OD1_Nomurabacteria_46_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12934..13134)
DNA (201bp) protein (67aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_46_18_curated
transmembrane_regions id=5044093 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_2465_14
GWA2_OD1_37_10, Parcubacteria, Bacteria

Not on your lists

comp(13131..13478)
DNA (348bp) protein (116aa)
Transcriptional regulator {ECO:0000313|EMBL:KKQ20397.1}; TaxID=1618810 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_37_10.;"
ArsR family transcriptional regulator id=5044094 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ArsR family transcriptional regulator
rifcsplowo2_01_scaffold_2465_15

Not on your lists

comp(13514..13906)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9A1D4_9BACI id=5103500 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO51829.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
rifcsplowo2_01_scaffold_2465_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13903..14832)
DNA (930bp) protein (310aa)
hypothetical protein id=5041917 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
Heavy metal transport/detoxification protein
rifcsplowo2_01_scaffold_2465_17
unknown

Not on your lists

comp(14829..15035)
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2465_18
unknown

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comp(15032..15523)
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2465_19
Parcubacteria bacterium GW2011_GWA1_33_6, Parcubacteria, Bacteria

Not on your lists

comp(15513..16115)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54316.1}; TaxID=1618781 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_33_6.;"
Putative uncharacterized protein id=2823235 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
rifcsplowo2_01_scaffold_2465_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16099..17061)
DNA (963bp) protein (321aa)
Cytochrome c biogenesis protein id=4010369 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein Tax=AR9
cytochrome C biogenesis transmembrane protein
rifcsplowo2_01_scaffold_2465_21
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17061..18179)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00037B5D08
hypothetical protein
Tax=AR17
rifcsplowo2_01_scaffold_2465_22
unknown

Not on your lists

comp(18183..18404)
DNA (222bp) protein (74aa)
id=4010371 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_2465_23

Not on your lists

comp(18406..19092)
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52451.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
seg id=5041711 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_2465_24
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(19222..19743)
DNA (522bp) protein (174aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
hypothetical protein id=5049638 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_2465_25
unknown

Not on your lists

19941..20108
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2465_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20162..20437
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003622305
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rifcsplowo2_01_scaffold_2465_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20439..21437)
DNA (999bp) protein (333aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K03778 D-lactate dehydrogenase [EC:1.1.1.28] id=5049630 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K03778 D-lactate dehydrogenase [EC:1.1.1.28] Tax=AR18
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
rifcsplowo2_01_scaffold_2465_28
R_OD1_44_24, Parcubacteria, Bacteria

Not on your lists

comp(21454..21873)
DNA (420bp) protein (140aa)
vitamin K epoxide reductase Tax=RIFCSPLOWO2_01_FULL_OD1_44_24_curated
Putative uncharacterized protein id=2824575 bin=GWC1_OD1_38_17 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Vitamin K epoxide reductase
rifcsplowo2_01_scaffold_2465_29
RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21866..22222)
DNA (357bp) protein (119aa)
hypothetical protein
thioredoxin Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated
hypothetical protein id=15190926 bin=GWC1_OP11_49_16_COMPLETE species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rifcsplowo2_01_scaffold_2465_30
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22311..22664
DNA (354bp) protein (118aa)
glyoxalase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A3EC
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:KFN11273.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" sourc
hypothetical protein
Displaying items 1-30 of 42 in total

View Taxonomy