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rifcsplowo2_01_scaffold_4109

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4109_1
unknown

Not on your lists

comp(1..729)
DNA (729bp) protein (243aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4109_2

Not on your lists


comp(916..1314)
DNA (399bp) protein (133aa)
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5048340 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003817}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
30S ribosomal protein S9
rifcsplowo2_01_scaffold_4109_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(1311..1733)
DNA (423bp) protein (141aa)
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5048339 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR18
50S ribosomal protein L13
rifcsplowo2_01_scaffold_4109_4
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(1807..2073)
DNA (267bp) protein (89aa)
Putative uncharacterized protein Tax=Altiarchaeum hamiconexum
Putative uncharacterized protein id=5048508 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
plasmid stabilization system
rifcsplowo2_01_scaffold_4109_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2076..2246)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71511.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
rifcsplowo2_01_scaffold_4109_6
unknown

Not on your lists


comp(2299..2658)
DNA (360bp) protein (120aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF Tax=AR20
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_4109_7
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2952..5936)
DNA (2985bp) protein (995aa)
pknB; serine/threonine protein kinase PknB (EC:2.7.11.1)
Serine/threonine protein kinase PknB n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIR2_MICPN
serine/threonine protein kinase with PASTA sensor(s) Tax=CG_Ignavi_02
rifcsplowo2_01_scaffold_4109_8

Not on your lists

comp(5974..6762)
DNA (789bp) protein (263aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_4109_9
unknown

Not on your lists

comp(6854..7408)
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4109_10
GWA1_OP11_39_11, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7510..8307)
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ93525.1}; TaxID=1618453 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_11.;"
rifcsplowo2_01_scaffold_4109_11
GWA1_OP11_39_11, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8304..9827)
DNA (1524bp) protein (508aa)
Polysaccharide deacetylase {ECO:0000313|EMBL:KKQ93526.1}; TaxID=1618453 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_11.;"
Polysaccharide deacetylase id=2916283 bin=GWC1_CPR2_39_9 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
xylanase
rifcsplowo2_01_scaffold_4109_12
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9829..11172)
DNA (1344bp) protein (448aa)
glycosyl transferase n=1 Tax=Streptomyces canus RepID=UPI00035C7AA5
putative glycosyltransferase Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
putative glycosyltransferase
rifcsplowo2_01_scaffold_4109_13
unknown

Not on your lists

11344..13164
DNA (1821bp) protein (607aa)
Minimal nucleotidyltransferase fused to HEPN domain n=1 Tax=nanoarchaeote Nst1 RepID=R1G367_9ARCH id=5103615 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Minimal nucleotidyltransferase fused to HEPN domain n=1 Tax=nanoarchaeote Nst1 RepID=R1G367_9ARCH Tax=AR20
Minimal nucleotidyltransferase fused to HEPN protein
rifcsplowo2_01_scaffold_4109_14
unknown

Not on your lists

13172..13462
DNA (291bp) protein (97aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4109_15
Blattabacterium sp. (Periplaneta americana), Blattabacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13474..13953
DNA (480bp) protein (160aa)
Chaperone protein DnaJ n=1 Tax=Blattabacterium sp. subsp. Periplaneta americana (strain BPLAN) RepID=D0J8P5_BLASP
dnaJ; chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=600809 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Blattabacteriaceae; Blattabact
rifcsplowo2_01_scaffold_4109_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(13931..15223)
DNA (1293bp) protein (431aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=CG_Woesearch_01
phosphomannomutase (EC:5.4.2.8)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037E78E5
rifcsplowo2_01_scaffold_4109_17
unknown

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15295..15762
DNA (468bp) protein (156aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4109_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15759..16691)
DNA (933bp) protein (311aa)
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=CG_Woesearch_02
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=5043631 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
galactose-1-phosphate uridylyltransferase
rifcsplowo2_01_scaffold_4109_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16684..18444)
DNA (1761bp) protein (587aa)
glycosyltransferase Tax=CG_Woesearch_02
Glycogen(Starch) synthase id=2740958 bin=GWC1_TM7_41_48 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC1_TM7_41_48 organism_group=TM7
glycogen synthase
rifcsplowo2_01_scaffold_4109_20
unknown

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18539..19489
DNA (951bp) protein (317aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4109_21

Not on your lists

19509..19799
DNA (291bp) protein (97aa)
YruB family glutaredoxin-like protein {ECO:0000313|EMBL:KHO55079.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Glutaredoxin-like protein, YruB-family id=2698725 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
glutaredoxin-like protein
rifcsplowo2_01_scaffold_4109_22
unknown

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19837..20280
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4109_23
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

20277..21050
DNA (774bp) protein (258aa)
hypothetical protein id=5042051 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein Tax=AR5
rifcsplowo2_01_scaffold_4109_24
unknown

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comp(21060..21524)
DNA (465bp) protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4109_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21528..22229)
DNA (702bp) protein (234aa)
enolase; K01689 enolase [EC:4.2.1.11] Tax=CG_Woesearch_02
enolase (EC:4.2.1.11)
PREDICTED: alpha-enolase isoform X3 n=1 Tax=Columba livia RepID=UPI00039900DF
Displaying 25 items

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