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rifcsplowo2_01_scaffold_16018

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16018_1

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comp(1..1545)
DNA (1545bp) protein (515aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4W9_METSW id=5103197 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
AAA family ATPase, CDC48 subfamily
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AJF62478.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_16018_2
AR20, Woesearchaeaota, DPANN, Archaea

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comp(1568..1924)
DNA (357bp) protein (119aa)
hypothetical protein
id=5103196 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_16018_3
unknown

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2037..2636
DNA (600bp) protein (200aa)
DNA repair and recombination protein RadB n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6USB2_METVS id=5103195 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA repair and recombination protein RadB n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6USB2_METVS Tax=AR20
DNA repair and recombination protein RadB
rifcsplowo2_01_scaffold_16018_4
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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2624..3379
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JGY2_9ARCH
hypothetical protein; K06870 uncharacterized protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_16018_5
unknown

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comp(3376..5439)
DNA (2064bp) protein (688aa)
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO id=5103194 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO Tax=AR20
DNA topoisomerase 1
rifcsplowo2_01_scaffold_16018_6
unknown

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comp(5481..6089)
DNA (609bp) protein (203aa)
Metallophosphoesterase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEP2_9EURY id=5103193 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metallophosphoesterase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEP2_9EURY Tax=AR20
Metallophosphoesterase
rifcsplowo2_01_scaffold_16018_7
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6268..6513)
DNA (246bp) protein (82aa)
id=5046822 Tax=CG_Woesearch_01
id=5046822 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_16018_8
unknown

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comp(6492..7778)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L234_9EURY id=5103192 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Serine--tRNA ligase n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L234_9EURY Tax=AR20
Serine-tRNA ligase
rifcsplowo2_01_scaffold_16018_9

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7882..8154
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WK99_METH6 id=5103191 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62472.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_16018_10
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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8154..8723
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UTJ1_MYCVA
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
hypothetical protein
rifcsplowo2_01_scaffold_16018_11
unknown

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comp(8739..9092)
DNA (354bp) protein (118aa)
Toprim domain protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPQ7_PERMH id=5103190 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Toprim domain protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPQ7_PERMH Tax=AR20
Toprim protein
rifcsplowo2_01_scaffold_16018_12
unknown

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9272..9670
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16018_13

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comp(9968..10519)
DNA (552bp) protein (184aa)
Marine sediment metagenome DNA, contig: S12H4_L04634 {ECO:0000313|EMBL:GAI78435.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 13 items

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