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rifcsplowo2_01_scaffold_2939

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2939_1
RLO_OP11_Levybacteria_39_17, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(215..880)
DNA (666bp) protein (222aa)
Putative metal dependent hydrolase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGR8_9EURY
metal dependent hydrolase Tax=RIFCSPLOWO2_12_FULL_OP11_Levybacteria_39_17_curated
metal dependent hydrolase
rifcsplowo2_01_scaffold_2939_2
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1279..2454)
DNA (1176bp) protein (392aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:GAM16460.1}; EC=1.1.1.40 {ECO:0000313|EMBL:GAM16460.1};; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source
NAD-dependent malic enzyme 4 n=1 Tax=Bacillus massiliosenegalensis RepID=UPI000314D653
NAD-dependent malic enzyme 4
rifcsplowo2_01_scaffold_2939_3
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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2557..6300
DNA (3744bp) protein (1248aa)
pol; DNA polymerase (EC:2.7.7.7); K02319 DNA polymerase I [EC:2.7.7.7] id=18314364 bin=Nanosalina tax=Nanosalina
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosal
DNA polymerase
rifcsplowo2_01_scaffold_2939_4

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comp(6551..7825)
DNA (1275bp) protein (425aa)
Putative peptidase family M23/M37 n=1 Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T352_9ZZZZ id=86461 bin=ACD58 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56506.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsplowo2_01_scaffold_2939_5
AR11, Woesearchaeaota, DPANN, Archaea

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7921..8628
DNA (708bp) protein (236aa)
ISA0963-4, putative transposase n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28888_ARCFU
Retroviral pol related endonuclease Tax=AR11
ISA0963-4 transposase
rifcsplowo2_01_scaffold_2939_6
unknown

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8902..9615
DNA (714bp) protein (238aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2939_7
CG_Woesearch_02, Woesearchaeota, Archaea

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9741..11012
DNA (1272bp) protein (424aa)
DNA and RNA helicase Tax=CG_Woesearch_02
PHP domain protein id=5800577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PHP protein
rifcsplowo2_01_scaffold_2939_8
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11193..12041)
DNA (849bp) protein (283aa)
Transposase IS3 family protein, putative integrase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTW8_METCG
transposase IS3 family protein integrase
Transposase IS3 family protein, putative integrase {ECO:0000313|EMBL:AEB67001.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" so
rifcsplowo2_01_scaffold_2939_9
unknown

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12124..12249
DNA (126bp) protein (42aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2939_10

Not on your lists

13422..13973
DNA (552bp) protein (184aa)
LemA protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q6N8_METMZ
LemA protein {ECO:0000313|EMBL:KHO50195.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
LemA protein
rifcsplowo2_01_scaffold_2939_11

Not on your lists

14002..14910
DNA (909bp) protein (303aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Protease HtpX homolog n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ57_RUBXD id=5103215 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protease HtpX-like protein
rifcsplowo2_01_scaffold_2939_12
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(15386..18073)
DNA (2688bp) protein (896aa)
P-type HAD superfamily ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Woesearch_03
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMY8_9FIRM
MgtA; cation transport ATPase
rifcsplowo2_01_scaffold_2939_13
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18198..19304
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG78950.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT
hexapeptide repeat-containing transferase
rifcsplowo2_01_scaffold_2939_14
CG_Woesearch_01, Woesearchaeota, Archaea

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19309..19719
DNA (411bp) protein (137aa)
id=3876217 Tax=CG_Woesearch_01
id=3876217 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rifcsplowo2_01_scaffold_2939_15
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(19716..20000)
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
Uncharacterised protein family UPF0175 id=5241736 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_2939_16
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20002..20490)
DNA (489bp) protein (163aa)
hypothetical protein
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
Putative uncharacterized protein id=5241735 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_2939_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20702..21379)
DNA (678bp) protein (226aa)
Integral membrane protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NUU5_9BACL id=85455 bin=ACD57 species=Gemella haemolysans genus=Gemella taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=AR17
rifcsplowo2_01_scaffold_2939_18

Not on your lists

21455..22414
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97905.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsplowo2_01_scaffold_2939_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

22516..24933
DNA (2418bp) protein (806aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RBG_13_Woesearchaeota_36_6_curated
Phosphoenolpyruvate synthase id=5799772 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
phosphoenolpyruvate synthase
rifcsplowo2_01_scaffold_2939_20

Not on your lists

comp(24930..25661)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97912.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Hypothetical protein
rifcsplowo2_01_scaffold_2939_21
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25727..25873)
DNA (147bp) protein (49aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
Uncharacterized protein id=5800244 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_2939_22
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(26106..27689)
DNA (1584bp) protein (528aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000375CB05 rbh
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=RBG_16_Chloroflexi_60_22_curated
rifcsplowo2_01_scaffold_2939_23

Not on your lists

comp(28158..28406)
DNA (249bp) protein (83aa)
Transposase IS4 family protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM81_9EURY
Marine sediment metagenome DNA, contig: S12H4_S13095 {ECO:0000313|EMBL:GAJ15795.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
transposase
rifcsplowo2_01_scaffold_2939_24
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28632..29069)
DNA (438bp) protein (146aa)
Transposase, IS5 family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6U1_METCZ
tnp-8; transposase, IS5 family
Transposase, IS5 family {ECO:0000313|EMBL:AFC99411.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii
rifcsplowo2_01_scaffold_2939_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

29543..29926
DNA (384bp) protein (128aa)
Uncharacterized protein id=5800381 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
rifcsplowo2_01_scaffold_2939_26
OP11_GWA2_32_13, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

29946..30194
DNA (249bp) protein (83aa)
GNAT family acetyltransferase Tax=OP11_GWA2_32_13
rifcsplowo2_01_scaffold_2939_27
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

30372..30596
DNA (225bp) protein (75aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsplowo2_01_scaffold_2939_28

Not on your lists

30597..30998
DNA (402bp) protein (134aa)
PilT protein domain protein n=1 Tax=mine drainage metagenome RepID=T1ASI2_9ZZZZ
PilT protein domain protein {ECO:0000313|EMBL:EQD43674.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
twitching mobility protein PilT
Displaying 28 items

View Taxonomy