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rifcsplowo2_01_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_141_1
unknown

Not on your lists

comp(57..518)
DNA (462bp) protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_2
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(680..2026)
DNA (1347bp) protein (449aa)
Phosphomannomutase n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RBS8_THETN
Phosphomannomutase/phosphoglucomutase ManB Tax=S_Thermacetogenium_phaeum_55_64
CpsG; phosphomannomutase
rifcsplowo2_01_scaffold_141_3

Not on your lists

comp(2070..2909)
DNA (840bp) protein (280aa)
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=5048689 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Mannose-1-phosphate guanylyltransferase, phosphomannomutase {ECO:0000313|EMBL:KHO45352.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KHO45352.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KHO45352.1};; TaxID=1579365 species=
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
rifcsplowo2_01_scaffold_141_4
unknown

Not on your lists

3067..3198
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3204..4472)
DNA (1269bp) protein (423aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B882_9ARCH
RNA modification enzyme, miab family Tax=CG_Woesearch_02
MiaB-like tRNA modifying enzyme
rifcsplowo2_01_scaffold_141_6
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

4638..5135
DNA (498bp) protein (166aa)
Transposase IS200-family protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BG40_9ZZZZ
hypothetical protein Tax=CG_Micra_01
transposase IS200-like protein
rifcsplowo2_01_scaffold_141_7
unknown

Not on your lists

5165..6295
DNA (1131bp) protein (377aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_8

Not on your lists

6390..6710
DNA (321bp) protein (107aa)
id=5048677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45340.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_141_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


6764..8125
DNA (1362bp) protein (454aa)
signal recognition particle Tax=CG_Woesearch_02
Signal recognition particle 54 kDa protein id=5800735 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
rifcsplowo2_01_scaffold_141_10
unknown

Not on your lists

comp(8199..9707)
DNA (1509bp) protein (503aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_11
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10157..10669
DNA (513bp) protein (171aa)
hypothetical protein id=5049517 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR17
rifcsplowo2_01_scaffold_141_12

Not on your lists

10671..11084
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51893.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
id=5049518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_141_13
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

11176..11379
DNA (204bp) protein (68aa)
hypothetical protein Tax=AR17
id=5102995 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_141_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11367..11708
DNA (342bp) protein (114aa)
hypothetical protein
id=5102994 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5102994 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_141_15
unknown

Not on your lists

11705..11857
DNA (153bp) protein (51aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

12234..13313
DNA (1080bp) protein (360aa)
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7) Tax=RBG_13_Bathyarchaeota_46_16b_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZG5_METBU
rifcsplowo2_01_scaffold_141_17
unknown

Not on your lists

comp(13310..14221)
DNA (912bp) protein (304aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14362..15141
DNA (780bp) protein (260aa)
id=5042250 Tax=CG_Woesearch_02
id=5042250 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_141_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

15376..15834
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein; K07158 Tax=RBG_13_Woesearchaeota_36_6_curated
Nucleotide binding protein, containing PIN domain
rifcsplowo2_01_scaffold_141_20
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


15847..16470
DNA (624bp) protein (208aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_141_21
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16504..16656
DNA (153bp) protein (51aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5
rifcsplowo2_01_scaffold_141_22
unknown

Not on your lists

16658..16972
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_23
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16978..17169
DNA (192bp) protein (64aa)
30S ribosomal protein S27ae n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLF6_9EURY
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
30S ribosomal protein S27
rifcsplowo2_01_scaffold_141_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17821..18723
DNA (903bp) protein (301aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=CG_Woesearch_02
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methionine aminopeptidase
rifcsplowo2_01_scaffold_141_25
unknown

Not on your lists

comp(18704..19081)
DNA (378bp) protein (126aa)

This feature has no annotations

rifcsplowo2_01_scaffold_141_26

Not on your lists


comp(19338..20642)
DNA (1305bp) protein (435aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5045800 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579365 species="Archaea.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
rifcsplowo2_01_scaffold_141_27
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20773..21102)
DNA (330bp) protein (110aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C478_DESTA
rifcsplowo2_01_scaffold_141_28
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21099..22145)
DNA (1047bp) protein (349aa)
hisG2; ATP phosphoribosyltransferase HisG2 (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RQH1_METFO
ATP phosphoribosyltransferase {ECO:0000313|EMBL:EKF85000.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methan
rifcsplowo2_01_scaffold_141_29
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(22142..22717)
DNA (576bp) protein (192aa)
Rossmann fold nucleotide-binding protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH06_9EURY
Rossmann fold nucleotide-binding protein Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
hypothetical protein
rifcsplowo2_01_scaffold_141_30
unknown

Not on your lists

comp(23931..24344)
DNA (414bp) protein (138aa)

This feature has no annotations

Displaying items 1-30 of 151 in total

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