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rifcsplowo2_01_scaffold_6402

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6402_1
AR11, Woesearchaeaota, DPANN, Archaea

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101..472
-----------------
DNA (372bp)
protein (124aa)
Putative uncharacterized protein Tax=AR11
hypothetical protein id=5048450 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_6402_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

474..827
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein Tax=AR11
hypothetical protein id=5048451 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_6402_3
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

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870..1547
-----------------
DNA (678bp)
protein (226aa)
Uridylate kinase {ECO:0000313|EMBL:KKS70233.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
Uncharacterized protein id=5800565 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
uridylate kinase
rifcsplowo2_01_scaffold_6402_4
unknown

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1549..1797
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6402_5
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1794..2300)
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BD51F
Tax=AR11
rifcsplowo2_01_scaffold_6402_6

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comp(2452..4128)
-----------------
DNA (1677bp)
protein (559aa)
Ubiquinone biosynthesis protein n=1 Tax=planctomycete KSU-1 RepID=I3IPJ5_9PLAN
ABC-1 protein {ECO:0000313|EMBL:KHO53628.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
2-polyprenylphenol 6-hydroxylase
rifcsplowo2_01_scaffold_6402_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4175..4930)
-----------------
DNA (756bp)
protein (252aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362FDBE
transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_6402_8

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5053..6054
-----------------
DNA (1002bp)
protein (334aa)
NMT1/THI5 like domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M261_GEODF
NMT1/THI5 like protein domain protein {ECO:0000313|EMBL:KKP33265.1}; TaxID=1618918 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_32_10.;"
NMT1/THI5 like domain-containing protein
rifcsplowo2_01_scaffold_6402_9
Parcubacteria bacterium GW2011_GWF1_52_5, Parcubacteria, Bacteria

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6063..6821
-----------------
DNA (759bp)
protein (253aa)
ABC transporter, permease protein possible sulfonate/taurine transporter inner membrane component n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LF79_RALME
Putative ABC transporter permease protein {ECO:0000313|EMBL:KKW27048.1}; TaxID=1618959 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_52_5.;"
tauC; ABC transporter permease
rifcsplowo2_01_scaffold_6402_10

Not on your lists

6803..7501
-----------------
DNA (699bp)
protein (233aa)
Taurine-transporting ATPase (EC:3.6.3.36)
Taurine-transporting ATPase n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RZH4_9CLOT
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KKP33267.1}; TaxID=1618918 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_32_10.;"
rifcsplowo2_01_scaffold_6402_11
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(7503..8252)
-----------------
DNA (750bp)
protein (250aa)
transcriptional regulator TrmB id=18248243 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transcriptional regulator TrmB Tax=AR5
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_6402_12
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8342..9352
-----------------
DNA (1011bp)
protein (337aa)
NMT1/THI5 like domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M261_GEODF
NMT1/THI5 like domain-containing protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
rifcsplowo2_01_scaffold_6402_13
Parcubacteria bacterium GW2011_GWF1_52_5, Parcubacteria, Bacteria

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9352..10113
-----------------
DNA (762bp)
protein (254aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRU2_9BRAD
Putative ABC transporter permease protein {ECO:0000313|EMBL:KKW27048.1}; TaxID=1618959 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_52_5.;"
ABC transporter permease
rifcsplowo2_01_scaffold_6402_14
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

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10110..10865
-----------------
DNA (756bp)
protein (252aa)
ABC transporter; K10831 taurine transport system ATP-binding protein [EC:3.6.3.36] Tax=CG_Falkow_04
ABC transporter related protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS28_METIM
ABC transporter
rifcsplowo2_01_scaffold_6402_15
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(10877..11179)
-----------------
DNA (303bp)
protein (101aa)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RBG_13_Nitrospirae_43_8_curated
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=18248461 bin=AR5_curated_draft species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
CutA1 divalent ion tolerance protein
rifcsplowo2_01_scaffold_6402_16
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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11279..12259
-----------------
DNA (981bp)
protein (327aa)
Nop58p-like protein pre mRNA splicing protein {ECO:0000313|EMBL:KKR78011.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
rifcsplowo2_01_scaffold_6402_17

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12240..12932
-----------------
DNA (693bp)
protein (231aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein id=5048460 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
fibrillarin
rifcsplowo2_01_scaffold_6402_18

Not on your lists

12970..13605
-----------------
DNA (636bp)
protein (212aa)
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBA6_METMS
Marine sediment metagenome DNA, contig: S12H4_C01944 {ECO:0000313|EMBL:GAI65690.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_6402_19
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

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13641..14384
-----------------
DNA (744bp)
protein (248aa)
hypothetical protein
alias=gwc1_scaffold_1147_10 Tax=RBG_19FT_COMBO_OP11_43_10_curated
alias=gwc1_scaffold_1147_10 id=14424176 bin=bin11_novelCP species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=bin11_novelCP organism_group=Unknown_CP
rifcsplowo2_01_scaffold_6402_20
AR11, Woesearchaeaota, DPANN, Archaea

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14386..15093
-----------------
DNA (708bp)
protein (236aa)
Cytochrome c biogenesis protein transmembrane region Tax=AR11
cytochrome c biogenesis transmembrane protein
cytochrome c biogenesis transmembrane protein id=5240958 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_6402_21

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15111..15404
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51599.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
ATP-cone id=5240959 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_6402_22
unknown

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15533..15640
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6402_23
CG_Woesearch_03, Woesearchaeota, Archaea

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15658..16464
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein id=5042274 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_6402_24

Not on your lists

16852..17310
-----------------
DNA (459bp)
protein (153aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Uncharacterized protein id=5799602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60933.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_6402_25
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

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17339..17743
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6MCN6_9BACL
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
rifcsplowo2_01_scaffold_6402_26
R_OD1_58_14, Parcubacteria, Bacteria

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17701..18102
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00037C20A2
disulfide bond oxidoreductase D family protein Tax=RIFCSPLOWO2_01_FULL_OD1_58_14_curated
Predicted membrane protein
rifcsplowo2_01_scaffold_6402_27
unknown

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18099..18941
-----------------
DNA (843bp)
protein (281aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6402_28
unknown

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18928..19026
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6402_29
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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19071..19517
-----------------
DNA (447bp)
protein (149aa)
Cytochrome c oxidase subunit II n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H951_ILYPC
cytochrome c oxidase subunit II
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:ADO82750.1}; Flags: Precursor;; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter poly
rifcsplowo2_01_scaffold_6402_30

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19630..19905
-----------------
DNA (276bp)
protein (92aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Regulatory protein MarR {ECO:0000313|EMBL:KHO46988.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
Displaying items 1-30 of 41 in total

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