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rifcsplowo2_01_scaffold_6619

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6619_1
unknown

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comp(3..122)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6619_2
unknown

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comp(182..781)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6619_3
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(782..2845)
-----------------
DNA (2064bp)
protein (688aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKU99675.1}; Flags: Fragment;; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
SMC protein
rifcsplowo2_01_scaffold_6619_4
unknown

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2938..3411
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6619_5
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(3427..4398)
-----------------
DNA (972bp)
protein (324aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000360FED9
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:KKU99677.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
rifcsplowo2_01_scaffold_6619_6
unknown

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comp(4437..4805)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6619_7
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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5009..5581
-----------------
DNA (573bp)
protein (191aa)
50S ribosomal protein L15e {ECO:0000313|EMBL:KKU99679.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L15
rifcsplowo2_01_scaffold_6619_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(5584..7149)
-----------------
DNA (1566bp)
protein (522aa)
alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
2-isopropylmalate synthase (EC:2.3.1.182)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036CA17E
rifcsplowo2_01_scaffold_6619_9
unknown

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7402..7578
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6619_10

Not on your lists

comp(7575..9017)
-----------------
DNA (1443bp)
protein (481aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO53472.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5102982 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_6619_11
unknown

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9186..9758
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6619_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9765..10172)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_6619_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10294..10821
-----------------
DNA (528bp)
protein (176aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Woesearch_02
Protein GrpE id=5799563 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
molecular chaperone GrpE (heat shock protein)
rifcsplowo2_01_scaffold_6619_14
CG_Woesearch_02, Woesearchaeota, Archaea

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10901..12793
-----------------
DNA (1893bp)
protein (631aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_02
Chaperone protein DnaK id=5799568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaK; molecular chaperone DnaK
rifcsplowo2_01_scaffold_6619_15
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12825..13301
-----------------
DNA (477bp)
protein (159aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B6P2_DESCC
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEF94416.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carb
rifcsplowo2_01_scaffold_6619_16
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

13303..13959
-----------------
DNA (657bp)
protein (219aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=CG_Anaero_01
AAA domain protein n=1 Tax=Prevotella intermedia (strain 17) RepID=I1YTA2_PREI7
AAA domain protein
rifcsplowo2_01_scaffold_6619_17
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

13961..14491
-----------------
DNA (531bp)
protein (177aa)
Uncharacterised protein family UPF0153 id=5799564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterised protein family UPF0153 Tax=AR15
rifcsplowo2_01_scaffold_6619_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14539..15645
-----------------
DNA (1107bp)
protein (369aa)
Chaperone protein DnaJ Tax=AR11
Chaperone protein DnaJ id=5800476 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaJ; chaperone protein DnaJ
rifcsplowo2_01_scaffold_6619_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(15647..15919)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein
id=5103720 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5103720 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_6619_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16193..16477
-----------------
DNA (285bp)
protein (95aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG id=5103719 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_6619_21
unknown

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comp(16669..17082)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

Displaying 21 items

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