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rifcsplowo2_01_scaffold_11562

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11562_1
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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198..428
-----------------
DNA (231bp)
protein (77aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacte
Putative uncharacterized protein id=4845855 bin=PER_GWC2_41_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
tRNA-splicing ligase
rifcsplowo2_01_scaffold_11562_2

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544..1767
-----------------
DNA (1224bp)
protein (408aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XHA1_9CHRO id=5103008 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62289.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_11562_3

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comp(1712..2803)
-----------------
DNA (1092bp)
protein (364aa)
id=5048717 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45380.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_11562_4
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3052..3480
-----------------
DNA (429bp)
protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG25438.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein id=5047312 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_11562_5
Staphylothermus hellenicus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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3570..4367
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DAY8_STAHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI31335.1}; TaxID=591019 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus hel
rifcsplowo2_01_scaffold_11562_6
GWF2_OD1_43_596, Yanofskybacteria, Parcubacteria, Bacteria

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4364..4582
-----------------
DNA (219bp)
protein (73aa)
UPF0235 protein Cyan7822_2348 id=2192998 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKT15869.1}; TaxID=1619035 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWF2_43_596.;"
hypothetical protein
rifcsplowo2_01_scaffold_11562_7
CG_Omnitr_03, Omnitrophica, Bacteria

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4590..5342
-----------------
DNA (753bp)
protein (251aa)
zinc/iron permease Tax=CG_Omnitr_03
zinc/iron permease
zinc/iron permease id=5240831 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_11562_8

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5374..5799
-----------------
DNA (426bp)
protein (142aa)
Protein archease n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYA7_METFV id=5103007 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein archease
Protein archease {ECO:0000313|EMBL:AJF62288.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_11562_9
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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comp(5805..6743)
-----------------
DNA (939bp)
protein (313aa)
Chromosome partitioning protein ParA n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP32_SORCE
parA3; ATPase; K03496 chromosome partitioning protein Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
chromosome partitioning protein ParA
rifcsplowo2_01_scaffold_11562_10
bacterium UASB270, Bacteria

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comp(6832..7431)
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK59465.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein; K08984 putative membrane protein id=5803238 bin=OD1_GWC2_34_28 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_11562_11

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comp(7471..9111)
-----------------
DNA (1641bp)
protein (547aa)
kgd; TPP-dependent 2-oxoglutarate decarboxylase Kgd (EC:5.5.1.4 2.2.1.6)
acetolactate synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B62DFA
Uncharacterized protein {ECO:0000313|EMBL:KKT25718.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
rifcsplowo2_01_scaffold_11562_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9320..10687)
-----------------
DNA (1368bp)
protein (456aa)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:KCZ71551.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KCZ71551.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candi
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.16)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZE0_METBU
rifcsplowo2_01_scaffold_11562_13
AR11, Woesearchaeaota, DPANN, Archaea

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comp(10751..11320)
-----------------
DNA (570bp)
protein (190aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW id=5103548 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein Tax=AR11
Iron-sulfur cluster assembly accessory protein
rifcsplowo2_01_scaffold_11562_14
AR11, Woesearchaeaota, DPANN, Archaea

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comp(11472..11681)
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003680DED
hypothetical protein Tax=AR11
rifcsplowo2_01_scaffold_11562_15
AR11, Woesearchaeaota, DPANN, Archaea

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comp(11685..12683)
-----------------
DNA (999bp)
protein (333aa)
Methionyl-tRNA synthetase, class Ia Tax=AR11
Methionine--tRNA ligase id=5799554 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methionyl-tRNA synthetase
Displaying 15 items

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