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rifcsplowo2_01_scaffold_4611

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4611_1
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(542..1003)
-----------------
DNA (462bp)
protein (154aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos36D8 RepID=Q648U9_9ARCH
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein
rifcsplowo2_01_scaffold_4611_2
unknown

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1157..2407
-----------------
DNA (1251bp)
protein (417aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4611_3
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

2438..2839
-----------------
DNA (402bp)
protein (134aa)
Putative uncharacterized protein id=7200485 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Putative uncharacterized protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
hypothetical protein
rifcsplowo2_01_scaffold_4611_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2856..3401)
-----------------
DNA (546bp)
protein (182aa)
Transcriptional regulator, XRE family Tax=AR11
hypothetical protein id=5049192 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative transcription regulator, containing CBS protein
rifcsplowo2_01_scaffold_4611_5
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

3924..4793
-----------------
DNA (870bp)
protein (290aa)
Mobile intron protein n=1 Tax=Bacillus cereus R309803 RepID=C2QLA7_BACCE
Uncharacterized protein Tax=RBG_13_Berkelbacteria_40_8_curated
LAGLIDADG-like domain protein
rifcsplowo2_01_scaffold_4611_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

4795..5988
-----------------
DNA (1194bp)
protein (398aa)
metK; methionine adenosyltransferase (EC:2.5.1.6) Tax=CG_Woesearch_01
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5049197 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S-adenosylmethionine synthetase (EC:2.5.1.6)
rifcsplowo2_01_scaffold_4611_7
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(6003..7049)
-----------------
DNA (1047bp)
protein (349aa)
peptidyl-arginine deiminase/hydrolase fusion protein; K10536 agmatine deiminase [EC:3.5.3.12] Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
Porphyromonas-type peptidyl-arginine deiminase/hydrolase fusion protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVS2_METCG
peptidyl-arginine deiminase/hydrolase fusion protein
rifcsplowo2_01_scaffold_4611_8
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

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comp(7088..7279)
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XDF4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
hypothetical protein
rifcsplowo2_01_scaffold_4611_9
unknown

Not on your lists

7913..8200
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4611_10
unknown

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comp(8413..8556)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4611_11
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(8553..9008)
-----------------
DNA (456bp)
protein (152aa)
PilT protein domain-containing protein Tax=CG_Elusi_05
Nucleotide binding protein PINc id=4302850 bin=GWC2_Clostridiales_40_7 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
PilT protein domain-containing protein
rifcsplowo2_01_scaffold_4611_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(9011..9868)
-----------------
DNA (858bp)
protein (286aa)
peptidyl-arginine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
peptidyl-arginine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] id=5094013 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase
rifcsplowo2_01_scaffold_4611_13
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(9919..10329)
-----------------
DNA (411bp)
protein (137aa)
S-adenosylmethionine decarboxylase-like protein; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=RBG_16_RIF03_38_11_curated
S-adenosylmethionine decarboxylase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A1D30A
S-adenosylmethionine decarboxylase-like protein
rifcsplowo2_01_scaffold_4611_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10729..11337)
-----------------
DNA (609bp)
protein (203aa)
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH id=5103755 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved hypothetical membrane protein, peptidase family M50 Tax=AR17
Conserved hypothetical membrane protein, peptidase family M50
rifcsplowo2_01_scaffold_4611_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(11349..11918)
-----------------
DNA (570bp)
protein (190aa)
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
rifcsplowo2_01_scaffold_4611_16
GWD2_Desulfuromonadales_54_10, GWD2_Desulfuromonadales_54_10, GWD2_Desulfuromonadales_54_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11920..12882)
-----------------
DNA (963bp)
protein (321aa)
id=1835647 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
id=1835647 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rifcsplowo2_01_scaffold_4611_17
unknown

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12914..13486
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4611_18

Not on your lists

13569..13994
-----------------
DNA (426bp)
protein (142aa)
id=5048681 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45344.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_4611_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13995..14342)
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein
RNA polymerase II, Rpb4 Tax=CG_Woesearch_02
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_4611_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(14343..14633)
-----------------
DNA (291bp)
protein (97aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5051516 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=AR18
50S ribosomal protein L21e
rifcsplowo2_01_scaffold_4611_21

Not on your lists

14792..15214
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
Uncharacterized protein {ECO:0000313|EMBL:KHO51871.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
rifcsplowo2_01_scaffold_4611_22

Not on your lists

15704..16510
-----------------
DNA (807bp)
protein (269aa)
DNA polymerase beta protein {ECO:0000313|EMBL:KHO52074.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA polymerase beta domain protein region (Fragment) id=4315674 bin=GWC2_Elusimicrobia_51_8 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
DNA polymerase beta protein
rifcsplowo2_01_scaffold_4611_23
unknown

Not on your lists

comp(16590..17309)
-----------------
DNA (720bp)
protein (240aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4611_24
RBG_16_CPR_42_10_curated, Bacteria

Not on your lists

comp(17395..20799)
-----------------
DNA (3405bp)
protein (1135aa)
PKD domain-containing protein Tax=RBG_16_CPR_42_10_curated
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PKD domain-containing protein
Displaying 24 items

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