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rifcsplowo2_01_scaffold_10476

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10476_1

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3..2546
-----------------
DNA (2544bp)
protein (848aa)
kh-domain/beta-lactamase-domain protein; K07041 id=5044630 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46364.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
KH-domain/beta-lactamase-domain protein
rifcsplowo2_01_scaffold_10476_2
unknown

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comp(2547..2825)
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10476_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2903..3796
-----------------
DNA (894bp)
protein (298aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=CG_Woesearch_02
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_10476_4
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3858..4958
-----------------
DNA (1101bp)
protein (367aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=B8QZV2_MYXFH
Fis family transcriptional regulator {ECO:0000313|EMBL:KFA88726.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.
sigma-54 dependent DNA-binding response regulator
rifcsplowo2_01_scaffold_10476_5

Not on your lists


comp(4955..6229)
-----------------
DNA (1275bp)
protein (425aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579365 species="Archaea.;"
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5045800 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Histidine-tRNA ligase
rifcsplowo2_01_scaffold_10476_6
unknown

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comp(6289..6453)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10476_7
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

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comp(6466..7083)
-----------------
DNA (618bp)
protein (206aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Putative phosphorylated carbohydrates phosphatase id=3327403 bin=GWA1_Kazan_50_15 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
Putative phosphorylated carbohydrates phosphatase Tax=GWA2_OP11_37_7
rifcsplowo2_01_scaffold_10476_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7168..7776)
-----------------
DNA (609bp)
protein (203aa)
O-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=CG_Woesearch_02
O-sialoglycoprotein endopeptidase (EC:2.7.11.1 3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] id=5050151 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_10476_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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7903..9138
-----------------
DNA (1236bp)
protein (412aa)
Alkaline phosphatase (EC:3.1.3.1) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Alkaline phosphatase (EC:3.1.3.1)
sna:Snas_4283 metallophosphoesterase id=1246277 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rifcsplowo2_01_scaffold_10476_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(9233..9937)
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_10476_11
unknown

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10051..10689
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10476_12
unknown

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10783..11244
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10476_13
AR9, Woesearchaeaota, DPANN, Archaea

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comp(11373..11912)
-----------------
DNA (540bp)
protein (180aa)
Heat shock protein DnaJ-like protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M9K9_9EURY
heat shock protein DnaJ-like protein Tax=AR9
heat shock protein DnaJ-like protein
rifcsplowo2_01_scaffold_10476_14

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comp(11946..12317)
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49375.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
SET domain id=69388 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rifcsplowo2_01_scaffold_10476_15
AR11, Woesearchaeaota, DPANN, Archaea

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comp(12550..13203)
-----------------
DNA (654bp)
protein (218aa)
rps3ae; 30S ribosomal protein S3AE; K02984 small subunit ribosomal protein S3Ae Tax=AR11
rps3ae; 30S ribosomal protein S3AE; K02984 small subunit ribosomal protein S3Ae id=5043666 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
SSU ribosomal protein S3AE
rifcsplowo2_01_scaffold_10476_16
unknown

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comp(13266..13382)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10476_17
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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comp(13443..13640)
-----------------
DNA (198bp)
protein (66aa)
id=1250239 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
id=1250239 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
rifcsplowo2_01_scaffold_10476_18
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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13725..14849
-----------------
DNA (1125bp)
protein (375aa)
Tax=GWA2_WOR_2_47_8_curated
rifcsplowo2_01_scaffold_10476_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

14918..15727
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein id=5799956 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_10476_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(15662..15919)
-----------------
DNA (258bp)
protein (86aa)
50S ribosomal protein L35Ae; K02917 large subunit ribosomal protein L35Ae id=5050384 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L35Ae; K02917 large subunit ribosomal protein L35Ae Tax=AR18
50S ribosomal protein L35Ae
rifcsplowo2_01_scaffold_10476_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16201..16890)
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein; K08971 putative membrane protein Tax=AR11
hypothetical protein
Displaying 21 items

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