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rifcsplowo2_01_scaffold_13659

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13659_1
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(1..609)
-----------------
DNA (609bp)
protein (203aa)
L-lactate dehydrogenase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R271_9CLOT
L-lactate dehydrogenase Tax=GWA2_OD1_40_9
L-lactate dehydrogenase
rifcsplowo2_01_scaffold_13659_2
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(654..1091)
-----------------
DNA (438bp)
protein (146aa)
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=GWA2_WOR_2_47_8_curated
CMP/dCMP deaminase zinc-binding n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCL7_ANADF
CMP/dCMP deaminase
rifcsplowo2_01_scaffold_13659_3
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(1137..1697)
-----------------
DNA (561bp)
protein (187aa)
Putative uncharacterized protein (Fragment) n=1 Tax=sediment metagenome RepID=D9PHA1_9ZZZZ
hypothetical protein Tax=GWA2_WOR_2_47_8_curated
hypothetical protein
rifcsplowo2_01_scaffold_13659_4
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1940..3091
-----------------
DNA (1152bp)
protein (384aa)
Serine protease inhibitor serpin-like protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HJQ9_THES4
serine protease inhibitor serpin-like protein
Serine protease inhibitor serpin-like protein {ECO:0000313|EMBL:AEK73152.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermo
rifcsplowo2_01_scaffold_13659_5
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

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comp(3244..3696)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003733AD9
Transcriptional repressor nrdR; K07738 transcriptional repressor NrdR Tax=RBG_13_OP11_40_15_curated
ATP-cone domain-containing protein
rifcsplowo2_01_scaffold_13659_6
unknown

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3852..4313
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_7
unknown

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4428..4562
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_8
AR11, Woesearchaeaota, DPANN, Archaea

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4553..5314
-----------------
DNA (762bp)
protein (254aa)
Putative uncharacterized protein Tax=AR11
Putative uncharacterized protein id=4104383 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
rifcsplowo2_01_scaffold_13659_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5311..5568
-----------------
DNA (258bp)
protein (86aa)
RNA binding protein n=2 Tax=Methanosarcina mazei RepID=M1PXB8_METMZ
hypothetical protein; K07574 RNA-binding protein Tax=CG_Woesearch_02
RNA binding protein
rifcsplowo2_01_scaffold_13659_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5569..6039)
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein
seg Tax=CG_Woesearch_02
seg id=5041657 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_13659_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6141..6344
-----------------
DNA (204bp)
protein (68aa)
hypothetical protein; K09791 hypothetical protein Tax=CG_Woesearch_02
Uncharacterised protein family UPF0434/Trm112 id=5043582 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_13659_12
unknown

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6506..7081
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_13
BJP_IG2157_CP_49_12, Bacteria

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7721..7945
-----------------
DNA (225bp)
protein (75aa)
YcfA family protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V7_9EURY
YcfA family protein
Tax=BJP_IG2157_CP_49_12
rifcsplowo2_01_scaffold_13659_14

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7947..8648
-----------------
DNA (702bp)
protein (234aa)
DNA alkylation repair enzyme superfamily id=5048464 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA alkylation repair enzyme superfamily {ECO:0000313|EMBL:KHO45498.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA alkylation repair enzyme superfamily
rifcsplowo2_01_scaffold_13659_15
unknown

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8712..8966
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_16
AR11, Woesearchaeaota, DPANN, Archaea

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comp(9161..10249)
-----------------
DNA (1089bp)
protein (363aa)
translation elongation factor aEF-2; K03234 elongation factor 2 Tax=AR11
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2
rifcsplowo2_01_scaffold_13659_17

Not on your lists

comp(10192..11259)
-----------------
DNA (1068bp)
protein (356aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Elongation factor 2
rifcsplowo2_01_scaffold_13659_18
unknown

Not on your lists

11601..12101
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_19

Not on your lists

comp(12123..12602)
-----------------
DNA (480bp)
protein (160aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045788 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
rifcsplowo2_01_scaffold_13659_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(12599..12793)
-----------------
DNA (195bp)
protein (65aa)
50S ribosomal protein L24e Tax=AR11
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ribosomal protein L24E
rifcsplowo2_01_scaffold_13659_21
unknown

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comp(12866..13315)
-----------------
DNA (450bp)
protein (150aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_22

Not on your lists


comp(13342..13659)
-----------------
DNA (318bp)
protein (106aa)
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e id=5045757 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S28e
rifcsplowo2_01_scaffold_13659_23

Not on your lists


comp(13661..14005)
-----------------
DNA (345bp)
protein (115aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5045790 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L7, large subunit ribosomal protein L7Ae {ECO:0000313|EMBL:KHO46403.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rpl7ae; 50S ribosomal protein L7
rifcsplowo2_01_scaffold_13659_24

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comp(14180..14848)
-----------------
DNA (669bp)
protein (223aa)
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:AIF00786.1}; EC=2.5.1.89 {ECO:0000313|EMBL:AIF00786.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="unculture
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5043940 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
rifcsplowo2_01_scaffold_13659_25

Not on your lists

14924..15820
-----------------
DNA (897bp)
protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00785.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
rifcsplowo2_01_scaffold_13659_26
unknown

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15857..16258
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16255..16791)
-----------------
DNA (537bp)
protein (179aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsplowo2_01_scaffold_13659_28

Not on your lists

comp(16793..17467)
-----------------
DNA (675bp)
protein (225aa)
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Hit-like protein involved in cell-cycle regulation {ECO:0000313|EMBL:KHO46464.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_13659_29
unknown

Not on your lists

comp(17543..17980)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13659_30
unknown

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18169..18270
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

Displaying items 1-30 of 50 in total

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