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rifcsplowo2_01_scaffold_29101

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_29101_1
R_OP11_Gottesmanbacteria_46_9, Gottesmanbacteria, Microgenomates, Bacteria

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comp(46..1014)
-----------------
DNA (969bp)
protein (323aa)
ATP-binding region ATPase domain protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_46_9_curated
ATP-binding region ATPase domain protein id=5044685 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative anti-sigma regulatory factor
rifcsplowo2_01_scaffold_29101_2
AR20, Woesearchaeaota, DPANN, Archaea

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1140..1544
-----------------
DNA (405bp)
protein (135aa)
id=5103324 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_29101_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1616..2188)
-----------------
DNA (573bp)
protein (191aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=AR11
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ
rifcsplowo2_01_scaffold_29101_4
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(2326..3972)
-----------------
DNA (1647bp)
protein (549aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B Tax=GWA2_WOR_2_47_8_curated
DNA gyrase subunit B id=4202465 bin=GWF2_OP3_43_52 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rifcsplowo2_01_scaffold_29101_5
unknown

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4477..4965
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_6
unknown

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comp(4966..5247)
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_7
unknown

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comp(5253..5396)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_8
unknown

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comp(5412..5558)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_9
GWC2_Verrucomicrobia_42_7_curated, Opitutae, Verrucomicrobia, Bacteria

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5728..6729
-----------------
DNA (1002bp)
protein (334aa)
phosphate uptake regulator PhoU Tax=GWC2_Verrucomicrobia_42_7_curated
SpoVT/AbrB protein
Transcriptional regulator SpoVT/AbrB family, containing PhoU domain id=5800333 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_29101_10
unknown

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6806..7543
-----------------
DNA (738bp)
protein (246aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_11
CG_CPR16-01, CG_CPR16, Bacteria

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comp(7546..8649)
-----------------
DNA (1104bp)
protein (368aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=CG_CPR16-01
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN6_ACIB4
purM; phosphoribosylformylglycinamidine cyclo-ligase
rifcsplowo2_01_scaffold_29101_12
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

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comp(8682..9338)
-----------------
DNA (657bp)
protein (219aa)
Protein dedA id=8265606 bin=CD_OP8_4m species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein; K03975 membrane-associated protein Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
hypothetical protein
rifcsplowo2_01_scaffold_29101_13

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comp(9489..10040)
-----------------
DNA (552bp)
protein (184aa)
Enoyl-[acyl-carrier protein] reductase I {ECO:0000313|EMBL:KHO50733.1}; EC=1.3.1.9 {ECO:0000313|EMBL:KHO50733.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037D3E62
rifcsplowo2_01_scaffold_29101_14

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comp(10163..10762)
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52130.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
seg id=5799725 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_29101_15
unknown

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comp(10759..11328)
-----------------
DNA (570bp)
protein (190aa)
PREDICTED: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1-like n=1 Tax=Metaseiulus occidentalis RepID=UPI00026585C7
rifcsplowo2_01_scaffold_29101_16
AR17, Woesearchaeaota, DPANN, Archaea

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comp(11318..11929)
-----------------
DNA (612bp)
protein (204aa)
ogfod1, D63, wu:fc33b08, zgc:66379; 2-oxoglutarate and iron-dependent oxygenase domain containing 1 (EC:1.14.11.-) Tax=AR17
Putative uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) RepID=F4PA44_BATDJ
OGFOD1; 2-oxoglutarate and iron-dependent oxygenase domain containing 1
rifcsplowo2_01_scaffold_29101_17
unknown

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12041..12688
-----------------
DNA (648bp)
protein (216aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_18
unknown

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13080..13397
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_19
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13409..13774
-----------------
DNA (366bp)
protein (122aa)
Regulatory protein ArsR n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0A9_FERPA
Uncharacterized protein {ECO:0000313|EMBL:AKB29752.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
regulatory protein ArsR
rifcsplowo2_01_scaffold_29101_20
unknown

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13963..14505
-----------------
DNA (543bp)
protein (181aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_21
unknown

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14454..15179
-----------------
DNA (726bp)
protein (242aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29101_22
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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comp(15301..16644)
-----------------
DNA (1344bp)
protein (448aa)
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RBG_16_Planctomycetes_43_13_curated
Phosphomethylpyrimidine synthase id=1250493 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hydroxymethylpyrimidine synthase
rifcsplowo2_01_scaffold_29101_23

Not on your lists

16719..17069
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3H3_NITMS
Uncharacterized protein {ECO:0000313|EMBL:KHO46547.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
hypothetical protein
Displaying 23 items

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