ggKbase home page

rifcsplowo2_01_scaffold_43850

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_43850_1

Not on your lists


204..701
-----------------
DNA (498bp)
protein (166aa)
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_43850_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


730..1512
-----------------
DNA (783bp)
protein (261aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=AR11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_43850_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

2196..2609
-----------------
DNA (414bp)
protein (138aa)
seg id=5800683 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_43850_4
unknown

Not on your lists

comp(2610..3230)
-----------------
DNA (621bp)
protein (207aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43850_5
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3319..3762
-----------------
DNA (444bp)
protein (148aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPI3_ACEAZ
rifcsplowo2_01_scaffold_43850_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3766..4395)
-----------------
DNA (630bp)
protein (210aa)
Extracellular nuclease n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WRM0_METH6
Extracellular nuclease
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_43850_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4606..5007)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037058C3
hypothetical protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_43850_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5004..5261)
-----------------
DNA (258bp)
protein (86aa)
Transcriptional regulator, AbrB family Tax=AR11
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator, AbrB family
Displaying 8 items

View Taxonomy