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rifcsplowo2_01_scaffold_9135

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9135_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(90..1085)
-----------------
DNA (996bp)
protein (332aa)
AsnC/Lrp family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
leucine-responsive regulatory protein 1; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5043670 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_9135_2
unknown

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1229..1996
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9135_3
unknown

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2027..2434
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9135_4

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2451..3596
-----------------
DNA (1146bp)
protein (382aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=5050172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:KHO44953.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
branched chain amino acid ABC transporter
rifcsplowo2_01_scaffold_9135_5

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3669..4484
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein
id=3230410 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
Uncharacterized protein {ECO:0000313|EMBL:KKW26207.1}; TaxID=1620414 species="Bacteria.;" source="bacterium GW2011_GWB1_52_7.;"
rifcsplowo2_01_scaffold_9135_6
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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4672..6360
-----------------
DNA (1689bp)
protein (563aa)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKS24572.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Glutamate--tRNA ligase id=5800680 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
glutamyl-tRNA synthetase
rifcsplowo2_01_scaffold_9135_7
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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7209..7391
-----------------
DNA (183bp)
protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS24571.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
rifcsplowo2_01_scaffold_9135_8
unknown

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comp(7395..7883)
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9135_9
unknown

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comp(7892..8527)
-----------------
DNA (636bp)
protein (212aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9135_10
unknown

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8681..9298
-----------------
DNA (618bp)
protein (206aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9135_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9303..10181)
-----------------
DNA (879bp)
protein (293aa)
Putative HTH-type transcriptional regulatory protein Metin_1036 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSZ1_METIM
XRE family transcriptional regulator; K07728 putative transcriptional regulator Tax=CG_Woesearch_02
transcriptional regulator, XRE family
rifcsplowo2_01_scaffold_9135_12

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10430..10966
-----------------
DNA (537bp)
protein (179aa)
(d)CMP kinase {ECO:0000256|SAAS:SAAS00054803}; EC=2.7.4.25 {ECO:0000256|SAAS:SAAS00054803};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] id=5046594 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cytidylate kinase (EC:2.7.4.14)
rifcsplowo2_01_scaffold_9135_13
unknown

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comp(11002..11244)
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9135_14

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11405..12061
-----------------
DNA (657bp)
protein (219aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Marine sediment metagenome DNA, contig: S01H1_S32338 {ECO:0000313|EMBL:GAG36499.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_9135_15
AR11, Woesearchaeaota, DPANN, Archaea

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12175..13320
-----------------
DNA (1146bp)
protein (382aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=AR11
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsplowo2_01_scaffold_9135_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(13364..14194)
-----------------
DNA (831bp)
protein (277aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371A96B
site-specific recombinase XerD Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
Displaying 16 items

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