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rifcsplowo2_01_scaffold_9511

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9511_1
AR11, Woesearchaeaota, DPANN, Archaea

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comp(2..379)
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
ribosomal protein S6 glutaminyl transferase; K05844 ribosomal protein S6 modification protein Tax=AR11
rifcsplowo2_01_scaffold_9511_2

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comp(458..814)
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
Metalloprotease {ECO:0000313|EMBL:KHO51318.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
alpha-L-glutamate ligase, RimK family
rifcsplowo2_01_scaffold_9511_3
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(854..1582)
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362FDBE
transcriptional regulator TrmB Tax=CG_Woesearch_03
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_9511_4
unknown

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1700..2173
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9511_5
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(2234..2623)
-----------------
DNA (390bp)
protein (130aa)
Putative nickel-responsive regulator n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKT1_THEBM
nickel responsive regulator NikR
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
rifcsplowo2_01_scaffold_9511_6

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2715..3380
-----------------
DNA (666bp)
protein (222aa)
high-affinity nickel-transporter id=5045818 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
High-affinity nickel-transporter {ECO:0000313|EMBL:KHO46431.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
protein UreH
rifcsplowo2_01_scaffold_9511_7
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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3382..4188
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000379B491
ExsB family protein; K06864 uncharacterized protein Tax=RBG_16_Caldithrix_48_16_curated
Conserved hypothetical protein CHP00268
rifcsplowo2_01_scaffold_9511_8
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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4181..4924
-----------------
DNA (744bp)
protein (248aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFL1_9CLOT rbh
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
Tax=BJP_IG2158_Zixibacteria_48_33
rifcsplowo2_01_scaffold_9511_9
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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4926..5501
-----------------
DNA (576bp)
protein (192aa)
Methyltransferase type 11 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUZ6_9BACT
Methyltransferase type 11 {ECO:0000313|EMBL:BAL59425.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
methyltransferase
rifcsplowo2_01_scaffold_9511_10
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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5503..6711
-----------------
DNA (1209bp)
protein (403aa)
UPF0272 protein Dtur_1544 n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=Y1544_DICTD
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
rifcsplowo2_01_scaffold_9511_11
unknown

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6701..6934
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9511_12
unknown

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7008..7493
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9511_13
AR15, Woesearchaeaota, DPANN, Archaea

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comp(7501..9186)
-----------------
DNA (1686bp)
protein (562aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=5799840 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Lysine--tRNA ligase Tax=AR15
rifcsplowo2_01_scaffold_9511_14
R_OD1_Kaiserbacteria_54_13, Kaiserbacteria, Parcubacteria, Bacteria

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comp(9234..10343)
-----------------
DNA (1110bp)
protein (370aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4); K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacter
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4)
aspartokinase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CDD2
rifcsplowo2_01_scaffold_9511_15
unknown

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comp(10457..10786)
-----------------
DNA (330bp)
protein (110aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG id=5103719 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_9511_16

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10894..11148
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein
id=5103720 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62998.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_9511_17
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

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comp(11177..12247)
-----------------
DNA (1071bp)
protein (357aa)
Aspartate-semialdehyde dehydrogenase id=3448622 bin=GWC2_ACD39_50_8 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_ACD39_50_8 organism_group=ACD39
asd; aspartate-semialdehyde dehydrogenase
Tax=BJP_IG2103_ACD39_50_23
rifcsplowo2_01_scaffold_9511_18
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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comp(12249..13571)
-----------------
DNA (1323bp)
protein (441aa)
aspartate kinase (EC:2.7.2.4) Tax=RBG_16_Planctomycetes_59_8_curated
aspartate kinase (EC:2.7.2.4)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003791EAE
rifcsplowo2_01_scaffold_9511_19
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

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comp(13573..14046)
-----------------
DNA (474bp)
protein (158aa)
GCN5-related N-acetyltransferase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RDS9_METP4
GCN5-like N-acetyltransferase Tax=RBG_16_RIF05_58_8_curated
GCN5-like N-acetyltransferase
rifcsplowo2_01_scaffold_9511_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(14043..14498)
-----------------
DNA (456bp)
protein (152aa)
LL-diaminopimelate aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=CG_Woesearch_03
Similar to N-succinyldiaminopimelate aminotransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3U7_9BACT
class I and II aminotransferase
rifcsplowo2_01_scaffold_9511_21
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(14613..15128)
-----------------
DNA (516bp)
protein (172aa)
Similar to N-succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:CAJ74692.1}; EC=2.6.1.17 {ECO:0000313|EMBL:CAJ74692.1};; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candida
Similar to N-succinyldiaminopimelate aminotransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3U7_9BACT
LL-diaminopimelate aminotransferase
rifcsplowo2_01_scaffold_9511_22
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15134..16396)
-----------------
DNA (1263bp)
protein (421aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSR9_METAC
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
rifcsplowo2_01_scaffold_9511_23
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(16398..17075)
-----------------
DNA (678bp)
protein (226aa)
Dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RBG_16_Spirochaete_67_19_curated
Dihydrodipicolinate synthase id=4958162 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dihydrodipicolinate synthase
Displaying 23 items

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