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rifcsplowo2_01_scaffold_18270

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18270_1
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1..375)
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=AR11
Putative uncharacterized protein id=5800243 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_18270_2

Not on your lists

comp(372..1598)
-----------------
DNA (1227bp)
protein (409aa)
Uncharacterized protein id=5800242 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61573.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_01_scaffold_18270_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1940..3199)
-----------------
DNA (1260bp)
protein (420aa)
hypothetical protein Tax=AR11
Putative uncharacterized protein id=5800241 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_18270_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3249..3941)
-----------------
DNA (693bp)
protein (231aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
ABC transporter, ATPase subunit id=5800240 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ABC transporter, ATP-binding protein
rifcsplowo2_01_scaffold_18270_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

4085..4783
-----------------
DNA (699bp)
protein (233aa)
seg id=5800296 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_18270_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4780..5625
-----------------
DNA (846bp)
protein (282aa)
id=5047432 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsplowo2_01_scaffold_18270_7
AR11, Woesearchaeaota, DPANN, Archaea

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5622..6260
-----------------
DNA (639bp)
protein (213aa)
methyltransferase small Tax=AR11
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
methyltransferase small
rifcsplowo2_01_scaffold_18270_8
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(6422..7258)
-----------------
DNA (837bp)
protein (279aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxI
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QAU0_METFO
putative ribose 1,5-bisphosphate isomerase
rifcsplowo2_01_scaffold_18270_9
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

7322..7711
-----------------
DNA (390bp)
protein (130aa)
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50); K00878 hydroxyethylthiazole kinase [EC:2.7.1.50] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=THIM_METAC
rifcsplowo2_01_scaffold_18270_10
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7822..8061
-----------------
DNA (240bp)
protein (80aa)
Hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1434
Hydroxyethylthiazole kinase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q8B8_METMZ
rifcsplowo2_01_scaffold_18270_11
AR20, Woesearchaeaota, DPANN, Archaea

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8113..8469
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_18270_12
AR11, Woesearchaeaota, DPANN, Archaea

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8471..9058
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein Tax=AR11
hypothetical protein id=5048442 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
peptidase M50
rifcsplowo2_01_scaffold_18270_13
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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comp(9051..9335)
-----------------
DNA (285bp)
protein (95aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=18248206 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
pterin-4-alpha-carbinolamine dehydratase (PHS) (EC:4.2.1.96)
pterin-4-alpha-carbinolamine dehydratase Tax=GWA2_Nitrospirae_42_11_curated
rifcsplowo2_01_scaffold_18270_14
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

comp(9378..10025)
-----------------
DNA (648bp)
protein (216aa)
conserved archaeal protein, aspartokinase domain protein Tax=CG_Micra_02
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_18270_15
unknown

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10121..10297
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18270_16

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comp(10294..10740)
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FD67_9BACT
Marine sediment metagenome DNA, contig: S01H1_S25777 {ECO:0000313|EMBL:GAG36946.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
mutT/nudix family protein
rifcsplowo2_01_scaffold_18270_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10928..11545
-----------------
DNA (618bp)
protein (206aa)
CTP synthase; K01937 CTP synthase [EC:6.3.4.2] Tax=CG_Woesearch_02
CTP synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B51BBE
CTP synthetase
rifcsplowo2_01_scaffold_18270_18

Not on your lists

11500..12576
-----------------
DNA (1077bp)
protein (359aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227};
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B51BBE
rifcsplowo2_01_scaffold_18270_19
unknown

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comp(12676..13377)
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18270_20
unknown

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comp(13379..14227)
-----------------
DNA (849bp)
protein (283aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18270_21
Treponema saccharophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(14234..15787)
-----------------
DNA (1554bp)
protein (518aa)
Apolipoprotein A1/A4/E (Fragment) n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EGX4_9SPIO
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:EIC03169.1}; Flags: Fragment;; TaxID=907348 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema saccharophilum DSM
phage tail tape measure protein, TP901 family
rifcsplowo2_01_scaffold_18270_22
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

15967..16455
-----------------
DNA (489bp)
protein (163aa)
AsnC family transcriptional regulator Tax=AR13
transcriptional regulator, AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA id=5048662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transcriptional regulator
rifcsplowo2_01_scaffold_18270_23

Not on your lists

16623..17315
-----------------
DNA (693bp)
protein (231aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein-export membrane protein SecF
rifcsplowo2_01_scaffold_18270_24

Not on your lists

17327..17626
-----------------
DNA (300bp)
protein (100aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_18270_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17623..19347
-----------------
DNA (1725bp)
protein (575aa)
secd/secf/secdf export membrane protein; K03072 preprotein translocase subunit SecD Tax=CG_Woesearch_02
hypothetical protein; K03072 preprotein translocase subunit SecD id=5047439 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_18270_26
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

19397..19687
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XQJ7_9BACT
Putative uncharacterized protein Tax=AR19
rifcsplowo2_01_scaffold_18270_27
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

19684..19914
-----------------
DNA (231bp)
protein (77aa)
Putative uncharacterized protein Tax=CG_Pacearch_06
Putative uncharacterized protein id=5046892 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_18270_28
AR18, Woesearchaeaota, DPANN, Archaea

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19928..20197
-----------------
DNA (270bp)
protein (90aa)
Putative uncharacterized protein id=5046867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Putative uncharacterized protein Tax=AR18
rifcsplowo2_01_scaffold_18270_29
unknown

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comp(20242..21021)
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

Displaying 29 items

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