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rifcsplowo2_01_scaffold_5105

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5105_1
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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186..4277
-----------------
DNA (4092bp)
protein (1364aa)
AAA family ATPase (EC:3.6.4.3)
ATPase AAA n=1 Tax=Thermococcus litoralis DSM 5473 RepID=S6A4M0_THELI
ATPase AAA {ECO:0000313|EMBL:AGT34332.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850
rifcsplowo2_01_scaffold_5105_2

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4471..5784
-----------------
DNA (1314bp)
protein (438aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=5041667 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|RuleBase:RU004457}; EC=6.3.5.- {ECO:0000256|RuleBase:RU004457};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsplowo2_01_scaffold_5105_3
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5868..6791
-----------------
DNA (924bp)
protein (308aa)
UPI0003D1B8B6 related cluster n=1 Tax=unknown RepID=UPI0003D1B8B6
Uncharacterized protein {ECO:0000313|EMBL:ETA67934.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tinda
filamentation induced by cAMP protein Fic
rifcsplowo2_01_scaffold_5105_4
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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6891..7436
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA id=5103857 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_5105_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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7433..7882
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein
id=3832830 Tax=RBG_16_Micrarchaeota_49_10_curated
id=3832830 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_5105_6
AR11, Woesearchaeaota, DPANN, Archaea

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7915..9369
-----------------
DNA (1455bp)
protein (485aa)
glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=AR11
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5041669 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsplowo2_01_scaffold_5105_7

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9503..9745
-----------------
DNA (243bp)
protein (81aa)
Marine sediment metagenome DNA, contig: S01H1_S00172 {ECO:0000313|EMBL:GAF98317.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Putative uncharacterized protein id=3087969 bin=GWA2_OP3_53_43 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
rifcsplowo2_01_scaffold_5105_8

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comp(9746..10513)
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
Marine sediment metagenome DNA, contig: S01H1_S06148 {ECO:0000313|EMBL:GAG12646.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_5105_9
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

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10572..11570
-----------------
DNA (999bp)
protein (333aa)
Putative ABC transporter, substrate binding protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH60_9BACT
Putative ABC transporter, substrate binding protein Tax=GWC2_OD1_37_14
ABC transporter substrate-binding protein
rifcsplowo2_01_scaffold_5105_10
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11575..12252
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000344EB5D
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AJE47862.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacte
rifcsplowo2_01_scaffold_5105_11
GWA2_OP11_40_6, Microgenomates, Bacteria

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12213..12956
-----------------
DNA (744bp)
protein (248aa)
taurine ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036FD824
Binding-protein-dependent transport systems inner membrane component Tax=GWA2_OP11_40_6
putative ABC transporter, permease protein
rifcsplowo2_01_scaffold_5105_12
unknown

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13203..14303
-----------------
DNA (1101bp)
protein (367aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5105_13

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14524..15393
-----------------
DNA (870bp)
protein (290aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50141.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
coiled-coil id=5044027 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_5105_14
unknown

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comp(15229..15627)
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5105_15
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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15705..16058
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EGQ42844.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
ATP synthase H subunit
rifcsplowo2_01_scaffold_5105_16
AR11, Woesearchaeaota, DPANN, Archaea

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16059..17903
-----------------
DNA (1845bp)
protein (615aa)
V-type ATP synthase subunit I (EC:3.6.3.14); K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=AR11
V-type ATPase 116 kDa subunit id=5800548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
V-type ATPase 116 kDa subunit
rifcsplowo2_01_scaffold_5105_17

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17950..18186
-----------------
DNA (237bp)
protein (79aa)
A1AO H+ ATPase subunit K (EC:3.6.3.14); K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] id=5042345 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:KHO46843.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KHO46843.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
H+-transporting two-sector ATPase, C subunit
rifcsplowo2_01_scaffold_5105_18

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18196..18741
-----------------
DNA (546bp)
protein (182aa)
H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] id=5042344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
H+transporting two-sector ATPase E subunit
rifcsplowo2_01_scaffold_5105_19

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18743..19822
-----------------
DNA (1080bp)
protein (360aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpC-1; A-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsplowo2_01_scaffold_5105_20

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19850..20149
-----------------
DNA (300bp)
protein (100aa)
V-type ATP synthase subunit F; K02122 V-type H+-transporting ATPase subunit F [EC:3.6.3.14] id=5042342 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Vacuolar H+transporting two-sector ATPase F subunit
rifcsplowo2_01_scaffold_5105_21
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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20163..20291
-----------------
DNA (129bp)
protein (43aa)
V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262903 species="Archaea;
V-type ATP synthase alpha chain n=2 Tax=Euryarchaeota RepID=M9SET6_9EURY
rifcsplowo2_01_scaffold_5105_22

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20281..21798
-----------------
DNA (1518bp)
protein (506aa)
ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] id=5042341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1579365 species="Archaea.
atpA-1; A-type ATP synthase subunit A
rifcsplowo2_01_scaffold_5105_23
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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21809..24751
-----------------
DNA (2943bp)
protein (981aa)
V-type ATP synthase beta chain n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=VATB_METKA
NtpB; vacuolar-type H+-ATPase subunit B, contains an intein
V-type ATP synthase beta chain; V-ATPase subunit B; Contains:; Mka AtpB intein; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Meth
rifcsplowo2_01_scaffold_5105_24

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24859..25476
-----------------
DNA (618bp)
protein (206aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] id=5042339 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
V-type ATPase subunit D
rifcsplowo2_01_scaffold_5105_25
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25690..26712)
-----------------
DNA (1023bp)
protein (341aa)
ATPase n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4TBI7_9XANT rbh
ATPase {ECO:0000313|EMBL:EFF45920.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantif
ATPase
rifcsplowo2_01_scaffold_5105_26

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26889..27242
-----------------
DNA (354bp)
protein (118aa)
Marine sediment metagenome DNA, contig: S01H1_L03091 {ECO:0000313|EMBL:GAF84723.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5044649 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_5105_27

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27226..27465
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C3AD8
Marine sediment metagenome DNA, contig: S01H1_L03091 {ECO:0000313|EMBL:GAF84724.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_5105_28

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27485..29443
-----------------
DNA (1959bp)
protein (653aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=5042338 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
rifcsplowo2_01_scaffold_5105_29
unknown

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comp(29449..29814)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5105_30
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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29895..31463
-----------------
DNA (1569bp)
protein (523aa)
pgk; phosphoglycerate kinase Pgk (EC:2.7.2.3) Tax=GWA2_WOR_2_47_8_curated
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=PGK_DICTD
Displaying items 1-30 of 44 in total

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