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rifcsplowo2_01_scaffold_5673

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5673_1
unknown

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3..611
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5673_2
AR11, Woesearchaeaota, DPANN, Archaea

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comp(621..2153)
-----------------
DNA (1533bp)
protein (511aa)
ATPase; K06915 Tax=AR11
ATPase; K06915 id=5042252 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATPase
rifcsplowo2_01_scaffold_5673_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2204..2944)
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A868F
Mg2+ and Co2+ transporter; K03284 magnesium transporter Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
rifcsplowo2_01_scaffold_5673_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3189..3878)
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein
seg Tax=RBG_13_Woesearchaeota_36_6_curated
seg id=5042266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_5673_5

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comp(3875..4429)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein
seg id=5042267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46765.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_5673_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4477..5358)
-----------------
DNA (882bp)
protein (294aa)
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY id=5103472 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease HII Tax=AR11
Ribonuclease
rifcsplowo2_01_scaffold_5673_7
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5364..5810)
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W214_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ37579.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsplowo2_01_scaffold_5673_8
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5807..6334)
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ37580.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsplowo2_01_scaffold_5673_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6734..7462)
-----------------
DNA (729bp)
protein (243aa)
Pseudouridine synthase id=5800397 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Pseudouridine synthase Tax=AR15
pseudouridine synthase
rifcsplowo2_01_scaffold_5673_10
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7529..8038
-----------------
DNA (510bp)
protein (170aa)
OsmC family protein id=4959269 bin=GWC2_Syntrophobacterales_56_13 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
OsmC family protein Tax=RBG_16_Deltaproteobacteria_58_17_curated
redox protein, regulator of disulfide bond formation
rifcsplowo2_01_scaffold_5673_11

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comp(8048..8425)
-----------------
DNA (378bp)
protein (126aa)
translation initiation factor 5A; K03263 translation initiation factor 5A id=5041911 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 5A {ECO:0000313|EMBL:KHO47339.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
translation initiation factor 5A precursor (eIF-5A)
rifcsplowo2_01_scaffold_5673_12
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8437..9315)
-----------------
DNA (879bp)
protein (293aa)
MscS mechanosensitive ion channel n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MR68_9EURY
MscS mechanosensitive ion channel
MscS mechanosensitive ion channel {ECO:0000313|EMBL:AFV24331.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanol
rifcsplowo2_01_scaffold_5673_13

Not on your lists

9701..11761
-----------------
DNA (2061bp)
protein (687aa)
transglutaminase domain protein id=5049172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transglutaminase protein {ECO:0000313|EMBL:KHO45163.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transglutaminase protein
rifcsplowo2_01_scaffold_5673_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11964..13820
-----------------
DNA (1857bp)
protein (619aa)
Uncharacterized protein n=4 Tax=Pyrococcus RepID=Q8U211_PYRFU id=5103802 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATPase; K06865 ATPase Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_5673_15
unknown

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comp(13821..14216)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5673_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14325..15599
-----------------
DNA (1275bp)
protein (425aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=CG_Woesearch_02
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=SYS_UNCMA
rifcsplowo2_01_scaffold_5673_17
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

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15611..16300
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
hypothetical protein
rifcsplowo2_01_scaffold_5673_18

Not on your lists

comp(16320..16646)
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035FEC2B
Marine sediment metagenome DNA, contig: S06H3_S00355 {ECO:0000313|EMBL:GAI24318.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_5673_19
unknown

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16761..16877
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5673_20
unknown

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17062..17394
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5673_21
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(17421..17945)
-----------------
DNA (525bp)
protein (175aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_5673_22
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

18050..19123
-----------------
DNA (1074bp)
protein (358aa)
ORC complex protein Cdc6/Orc1 Tax=RBG_13_Woesearchaeota_36_6_curated
ORC1-type DNA replication protein id=5800648 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ORC1-type DNA replication protein
rifcsplowo2_01_scaffold_5673_23
unknown

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comp(19124..20077)
-----------------
DNA (954bp)
protein (318aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5673_24
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20109..20936)
-----------------
DNA (828bp)
protein (276aa)
putative dienelactone hydrolase family
Putative dienelactone hydrolase family {ECO:0000313|EMBL:AIC16683.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
carboxymethylenebutenolidase id=14427563 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rifcsplowo2_01_scaffold_5673_25
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(20939..21211)
-----------------
DNA (273bp)
protein (91aa)
Acylphosphatase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFP8_ACIB4
acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:EDY34860.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
rifcsplowo2_01_scaffold_5673_26
unknown

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21611..21784
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

Displaying 26 items

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