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rifcsplowo2_01_scaffold_30078

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_30078_1
unknown

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1..96
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

rifcsplowo2_01_scaffold_30078_2
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

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213..473
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DBC9D
Transcription regulator, SpoVT/AbrB family {ECO:0000313|EMBL:KKT71667.1}; TaxID=1618384 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB1_44_6.;"
AbrB family transcriptional regulator
rifcsplowo2_01_scaffold_30078_3
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

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470..883
-----------------
DNA (414bp)
protein (138aa)
PilT protein domain protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EA35_9FIRM
PIN domain protein Tax=GWB1_OP11_44_6
PilT protein domain-containing protein
rifcsplowo2_01_scaffold_30078_4

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comp(907..1620)
-----------------
DNA (714bp)
protein (238aa)
Glycosyl transferase, family 2 n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I974_METB6
Marine sediment metagenome DNA, contig: S01H1_L01227 {ECO:0000313|EMBL:GAF76793.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
glycosyl transferase family protein
rifcsplowo2_01_scaffold_30078_5
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

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1914..3380
-----------------
DNA (1467bp)
protein (489aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
hypothetical protein
rifcsplowo2_01_scaffold_30078_6
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

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comp(3370..4500)
-----------------
DNA (1131bp)
protein (377aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RBG_13_Chloroflexi_54_8_curated
Glycosyltransferase id=3639083 bin=GWA1_Kazan_50_15 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
group 1 glycosyl transferase
rifcsplowo2_01_scaffold_30078_7
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4505..5200)
-----------------
DNA (696bp)
protein (232aa)
GDP-mannose--undecaprenyl-phosphate mannosyltransferase, putative id=4902582 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
family glycosyltransferase Tax=GWB2_Deltaproteobacteria_55_19_curated
Glycosyl transferase family 2
rifcsplowo2_01_scaffold_30078_8

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comp(5208..6209)
-----------------
DNA (1002bp)
protein (334aa)
Oxidoreductase Gfo/Idh/MocA family/transferase hexapeptide repeat protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SG88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN20788.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
oxidoreductase domain-containing protein
rifcsplowo2_01_scaffold_30078_9
R_Omnitrophica_44_11, Omnitrophica, Bacteria

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6282..6665
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
Putative uncharacterized protein id=3333226 bin=GWA2_OP3_52_12 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
rifcsplowo2_01_scaffold_30078_10
unknown

Not on your lists

6712..7107
-----------------
DNA (396bp)
protein (132aa)
Subfamily IIIC HAD-superfamily phosphatase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JD18_9CLOT id=5103410 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Subfamily IIIC HAD-superfamily phosphatase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JD18_9CLOT Tax=AR20
Subfamily IIIC HAD-superfamily phosphatase
rifcsplowo2_01_scaffold_30078_11
unknown

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7082..7765
-----------------
DNA (684bp)
protein (228aa)
Subfamily IIIC HAD-superfamily phosphatase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JD18_9CLOT id=5103410 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Subfamily IIIC HAD-superfamily phosphatase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JD18_9CLOT Tax=AR20
Subfamily IIIC HAD-superfamily phosphatase
rifcsplowo2_01_scaffold_30078_12
unknown

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7835..8254
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

rifcsplowo2_01_scaffold_30078_13
Caldithrix abyssi, Caldithrix, Bacteria

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comp(8273..9367)
-----------------
DNA (1095bp)
protein (365aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI000377DB34
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EHO40257.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
UDP-N-acetylglucosamine 2-epimerase
rifcsplowo2_01_scaffold_30078_14
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(9403..9846)
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003794ECC
membrane-spanning protein Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_30078_15
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

9900..10808
-----------------
DNA (909bp)
protein (303aa)
aminoglycoside 3-N-acetyltransferase; K00662 aminoglycoside N3'-acetyltransferase [EC:2.3.1.81] Tax=CG_Elusi_03
Aminoglycoside N3''-acetyltransferase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLU5_9CLOT
aminoglycoside 3-N-acetyltransferase
rifcsplowo2_01_scaffold_30078_16
GWA2_RIF03_38_11_curated, RIF3, Bacteria

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comp(10800..11966)
-----------------
DNA (1167bp)
protein (389aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYU7_META2
hypothetical protein Tax=GWA2_RIF03_38_11_curated
hypothetical protein
Displaying 16 items

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